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  3. Ben Fabry

Ben Fabry

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  • Ben Fabry
  • Wolfgang Goldmann
  • Christian Kuster
  • Kathrin Dauth
  • Julia-Ciara Schnell
  • Ingo Thievessen
  • Sebastian Richter
  • Christoph Mark
  • Alexander Tesler
  • Alexander Winterl
  • David Böhringer
  • Lovis Schween
  • Lars Bischof
  • Johannes Bartl
  • Natalie Huhn
  • Radik Gataulin
  • Ara Cho
  • Elahe Afshar

Ben Fabry

Ben Fabry

Prof. Dr. Ben Fabry

Head

Biophysics Group

Room: Room 02.072
  • Phone number: +49 9131 85-25610
  • Email: ben.fabry@fau.de
  • Website: https://bio.physik.fau.de
More › Details for Ben Fabry

Our laboratory studies the mechanical behavior of cells, including cell adhesion, spreading, deformation, motion, migration, invasion, stiffness, viscosity, force generation and mechano-transduction. These mechanical processes are essential for many cellular functions. Abnormal cell mechanical behavior is often associated with severe disorders such as cancer or cardiovascular diseases. We collaborate with research groups worldwide to develop novel technologies that enable us to measure or apply small forces (in the pico-Newton range) and deformations (in the low nano-meter range) that are relevant for cell mechanical functions. We use these technologies to study the behavior of cells on nano-structured biomaterials, cancer cell migration in 3-dimensional biopolymer networks, or the biochemistry of adhesion proteins.

Ben Fabry studied Electrical Engineering at the Technical University of Dresden, Germany. In 1991 he joined the R&D group of the Anesthesiology and Intensive Care Medicine division at Draegerwerk AG, Luebeck, Germany, and subsequently the Department of Clinical Physiology at the University of Basel, Switzerland. After receiving his doctorate degree in Electrical Engineering in 1995, he was a research assistant, and after 1999 a research associate at the Physiology Program, Harvard School of Public Health, Boston, MA, where he worked on smooth muscle physiology and cellular biomechanics. Since 2003, Ben Fabry has been Professor for Medical Physics and Technology at the University of Erlangen-Nuremberg, Germany, and since 2005 he has been the administrative head of the Center for Medical Physics and Technology at the University.

2026

2026

  • Immune cells employ intermittent integrin-mediated traction forces for 3D migration
    Czerwinski, Tina; Bischof, Lars; Böhringer, David; Kara, Sibel; Strissel, Pamela L.; Strick, Reiner; Huhn, Natalie; Winterl, Alexander; Gerum, Richard; Wittmann, Ernst; Schneider, Michael; Beckmann, Matthias W.; Nusser, Gina; Wiesinger, Manuel; Budday, Silvia; Lux, Anja; Voskens, Caroline; Fabry, Ben; Mark, Christoph
    In Proceedings of the National Academy of Sciences, volume 123, number 11, pp. e2524427123, 2026. [bibtex] [pdf] [doi]
  • Compression‐Tension‐Asymmetry and Stiffness Nonlinearity of Collagen‐Matrigel Composite Hydrogels
    Böhringer, David; Hinrichsen, Jan; Gataulin, Radik; Wiedenmann, Sandra; Spörrer, Marina; Sherifova, Selda; Steinmann, Paul; Holzapfel, Gerhard A.; Fabry, Ben; Budday, Silvia
    In Advanced Healthcare Materials, volume 15, number 9, pp. e03052, 2026. [bibtex] [pdf] [doi]
  • Advanced Characterization of Plastron on Cassie–Baxter Superhydrophobic Surfaces by Drop Adhesion Force
    Fomicheva, Iana; Druzhinin, Petr; Pavlovska, Mariia; Ferner, Karen; Frese, Daniel; Sarau, George; Mazare, Anca; Goldmann, Wolfgang H.; Fabry, Ben; Christiansen, Silke H.; Tesler, Alexander B.
    In Langmuir, volume 42, number 12, pp. 8280–8289, 2026. [bibtex] [pdf] [doi]
2025

2025

  • Contractility of striated muscle tissue increases with environmental stiffness according to a power-law relationship
    Kah, Delf; Lell, Julia; Wach, Tina; Spörrer, Marina; Dessalles, Claire A.; Kraxner, Julia; Wiedenmann, Sandra; Gerum, Richard C.; Vergarajauregui, Silvia; Esser, Tilman U.; Böhringer, David; Engel, Felix B.; Thievessen, Ingo; Fabry, Ben
    In npj Biological Physics and Mechanics, volume 2, number 1, pp. 7, 2025. [bibtex] [pdf] [doi]
  • Prediction and prevention of ventilation impairments during bronchoscopy
    Fabry, Ben; Bonakdar, Navid; Kuster, Christian; Bartl, Johannes; Krischke, Frederick; Francis, Roland
    In Intensive Care Medicine Experimental, volume 13, number 1, pp. 130, 2025. [bibtex] [pdf] [doi]
2024

2024

  • Remote sensing of emperor penguin abundance and breeding success
    Winterl, Alexander; Richter, Sebastian; Houstin, Aymeric; Barracho, Téo; Boureau, Matthieu; Cornec, Clément; Couet, Douglas; Cristofari, Robin; Eiselt, Claire; Fabry, Ben; Krellenstein, Adélie; Mark, Christoph; Mainka, Astrid; Ménard, Delphine; Morinay, Jennifer; Pottier, Susie; Schloesing, Elodie; Le Bohec, Céline; Zitterbart, Daniel P.
    In Nature Communications, volume 15, number 1, pp. 4419, 2024. [bibtex] [pdf] [doi]
  • Predicting plastron thermodynamic stability for underwater superhydrophobicity
    Tesler, Alexander B.; Nurmi, Heikki A.; Kolle, Stefan; Prado, Lucia H.; Karunakaran, Bhuvaneshwari; Mazare, Anca; Erceg, Ina; De Brito Soares, Íris; Sarau, George; Christiansen, Silke; Stafslien, Shane; Alvarenga, Jack; Aizenberg, Joanna; Fabry, Ben; Ras, Robin H. A.; Goldmann, Wolfgang H.
    In Communications Materials, volume 5, number 1, pp. 112, 2024. [bibtex] [pdf] [doi]
  • Cancer cell migration depends on adjacent ASC and adipose spheroids in a 3D bioprinted breast cancer model
    Horder, Hannes; Böhringer, David; Endrizzi, Nadine; Hildebrand, Laura S; Cianciosi, Alessandro; Stecher, Sabrina; Dusi, Franziska; Schweinitzer, Sophie; Watzling, Martin; Groll, Jürgen; Jüngst, Tomasz; Teßmar, Jörg; Bauer-Kreisel, Petra; Fabry, Ben; Blunk, Torsten
    In Biofabrication, volume 16, number 3, pp. 035031, 2024. [bibtex] [pdf] [doi]
  • Dynamic traction force measurements of migrating immune cells in 3D biopolymer matrices
    Böhringer, David; Cóndor, Mar; Bischof, Lars; Czerwinski, Tina; Gampl, Niklas; Ngo, Phuong Anh; Bauer, Andreas; Voskens, Caroline; López-Posadas, Rocío; Franze, Kristian; Budday, Silvia; Mark, Christoph; Fabry, Ben; Gerum, Richard
    In Nature Physics, 2024. [bibtex] [pdf] [doi]
  • How to minimize mechanical power during controlled mechanical ventilation
    Fabry, Ben
    In Intensive Care Medicine Experimental, volume 12, number 114, 2024. [bibtex] [pdf] [doi]
2023

2023

  • Fiber alignment in 3D collagen networks as a biophysical marker for cell contractility
    Bohringer, D.; Bauer, A.; Moravec, I.; Bischof, L.; Kah, D.; Mark, C.; Grundy, T. J.; Gorlach, E.; O'Neill, G. M.; Budday, S.; Strissel, P. L.; Strick, R.; Malandrino, A.; Gerum, R.; Mak, M.; Rausch, M.; Fabry, B.
    In Matrix Biol, volume 124, pp. 39–48, 2023. [bibtex] [pdf] [doi]
  • Simulated microgravity during clino-rotation is disturbed by spurious fluid motion
    Mansour, Janet; Berwanger, Carolin; Jung, Marcel; Eichinger, Ludwig; Fabry, Ben; Clemen, Christoph S.
    In bioRxiv, pp. 2023.02.10.527979, 2023. [bibtex] [pdf] [doi]
  • Silicone-Based Lubricant-Infused Slippery Coating Covalently Bound to Aluminum Substrates for Underwater Applications
    Prado, Lucia H.; Böhringer, David; Mazare, Anca; Sotelo, Lamborghini; Sarau, George; Christiansen, Silke; Fabry, Ben; Schmuki, Patrik; Virtanen, Sannakaisa; Goldmann, Wolfgang H.; Tesler, Alexander B.
    In ACS Applied Materials & Interfaces, 2023. [bibtex] [pdf] [doi]
  • Directionality of developing skeletal muscles is set by mechanical forces
    Sunadome, Kazunori; Erickson, Alek G.; Kah, Delf; Fabry, Ben; Adori, Csaba; Kameneva, Polina; Faure, Louis; Kanatani, Shigeaki; Kaucka, Marketa; Dehnisch Ellström, Ivar; Tesarova, Marketa; Zikmund, Tomas; Kaiser, Jozef; Edwards, Steven; Maki, Koichiro; Adachi, Taiji; Yamamoto, Takuya; Fried, Kaj; Adameyko, Igor
    In Nature Communications, volume 14, number 1, pp. 3060, 2023. [bibtex] [pdf] [doi]
  • Long-term stability of aerophilic metallic surfaces underwater
    Tesler, A. B.; Kolle, S.; Prado, L. H.; Thievessen, I.; Bohringer, D.; Backholm, M.; Karunakaran, B.; Nurmi, H. A.; Latikka, M.; Fischer, L.; Stafslien, S.; Cenev, Z. M.; Timonen, J. V. I.; Bruns, M.; Mazare, A.; Lohbauer, U.; Virtanen, S.; Fabry, B.; Schmuki, P.; Ras, R. H. A.; Aizenberg, J.; Goldmann, W. H.
    In Nat Mater, 2023. [bibtex] [pdf] [doi]
2022

2022

  • Calcium supplementation of bioinks reduces shear stress-induced cell damage during bioprinting
    Fischer, Lena; Nosratlo, Mojtaba; Hast, Katharina; Karakaya, Emine; Ströhlein, Nadine; Esser, Tilman U.; Gerum, Richard; Richter, Sebastian; Engel, Felix; Detsch, Rainer; Fabry, Ben; Thievessen, Ingo
    In Biofabrication, volume 14, number 4, pp. 045005, 2022. [bibtex] [pdf] [doi]
  • Viscoelastic properties of suspended cells measured with shear flow deformation cytometry
    Gerum, Richard; Mirzahossein, Elham; Eroles, Mar; Elsterer, Jennifer; Mainka, Astrid; Bauer, Andreas; Sonntag, Selina; Winterl, Alexander; Bartl, Johannes; Fischer, Lena; Abuhattum, Shada; Goswami, Ruchi; Girardo, Salvatore; Guck, Jochen; Schrüfer, Stefan; Ströhlein, Nadine; Nosratlo, Mojtaba; Herrmann, Harald; Schultheis, Dorothea; Rico, Felix; Müller, Sebastian Johannes; Gekle, Stephan; Fabry, Ben
    In eLife, volume 11, pp. e78823, 2022. [bibtex] [pdf] [doi]
  • Biologging of emperor penguins-Attachment techniques and associated deployment performance
    Houstin, A.; Zitterbart, D. P.; Winterl, A.; Richter, S.; Planas-Bielsa, V.; Chevallier, D.; Ancel, A.; Fournier, J.; Fabry, B.; Le Bohec, C.
    In PLoS One, volume 17, number 8, pp. e0265849, 2022. [bibtex] [pdf] [doi]
  • Juvenile emperor penguin range calls for extended conservation measures in the Southern Ocean
    Houstin, A.; Zitterbart, D. P.; Heerah, K.; Eisen, O.; Planas-Bielsa, V.; Fabry, B.; Le Bohec, C.
    In R Soc Open Sci, volume 9, number 8, pp. 211708, 2022. [bibtex] [pdf] [doi]
  • Epithelial RAC1-dependent cytoskeleton dynamics controls cell mechanics, cell shedding and barrier integrity in intestinal inflammation
    Martínez-Sánchez, Luz del Carmen; Ngo, Phuong Anh; Pradhan, Rashmita; Becker, Lukas-Sebastian; Boehringer, David; Soteriou, Despina; Kubankova, Marketa; Schweitzer, Christine; Koch, Tatyana; Thonn, Veronika; Erkert, Lena; Stolzer, Iris; Günther, Claudia; Becker, Christoph; Weigmann, Benno; Klewer, Monika; Daniel, Christoph; Amann, Kerstin; Tenzer, Stefan; Atreya, Raja; Bergo, Martin; Brakebusch, Cord; Watson, Alastair J M; Guck, Jochen; Fabry, Ben; Atreya, Imke; Neurath, Markus F; López-Posadas, Rocío
    In Gut, 2022. [bibtex] [pdf]
  • Plectin-mediated cytoskeletal crosstalk controls cell tension and cohesion in epithelial sheets
    Prechova, M.; Adamova, Z.; Schweizer, A. L.; Maninova, M.; Bauer, A.; Kah, D.; Meier-Menches, S. M.; Wiche, G.; Fabry, B.; Gregor, M.
    In J Cell Biol, volume 221, number 3, 2022. [bibtex] [pdf] [doi]
  • Dual-wavelength stopped-flow analysis of the lateral and longitudinal assembly kinetics of vimentin
    Schween, Lovis; Mücke, Norbert; Portet, Stéphanie; Goldmann, Wolfgang H.; Herrmann, Harald; Fabry, Ben
    In Biophysical Journal, volume 121, number 20, pp. 3850–3861, 2022. [bibtex] [pdf] [doi]
  • The desmin mutation R349P increases contractility and fragility of stem cell-generated muscle micro-tissues
    Spörrer, Marina; Kah, Delf; Gerum, Richard C.; Reischl, Barbara; Huraskin, Danyil; Dessalles, Claire A.; Schneider, Werner; Goldmann, Wolfgang H.; Herrmann, Harald; Thievessen, Ingo; Clemen, Christoph S.; Friedrich, Oliver; Hashemolhosseini, Said; Schröder, Rolf; Fabry, Ben
    In Neuropathology and Applied Neurobiology, volume 48, number 3, pp. e12784, 2022. [bibtex] [pdf] [doi]
  • The focal adhesion protein β-parvin controls cardiomyocyte shape and sarcomere assembly in response to mechanical load
    Thievessen, Ingo; Suhr, Frank; Vergarajauregui, Silvia; Böttcher, Ralph T.; Brixius, Klara; Rosenberger, Georg; Dewald, Oliver; Fleischmann, Bernd K.; Ghanem, Alexander; Krüger, Marcus; Engel, Felix B.; Fabry, Ben; Bloch, Wilhelm; Fässler, Reinhard
    In Current Biology, 2022. [bibtex] [pdf] [doi]
2021

2021

  • pyTFM: A tool for traction force and monolayer stress microscopy
    Bauer, Andreas; Prechová, Magdalena; Fischer, Lena; Thievessen, Ingo; Gregor, Martin; Fabry, Ben
    In PLOS Computational Biology, volume 17, number 6, pp. e1008364, 2021. [bibtex] [pdf] [doi]
  • Stress relaxation amplitude of hydrogels determines migration, proliferation, and morphology of cells in 3-D culture
    Hazur, Jonas; Endrizzi, Nadine; Schubert, Dirk W.; Boccaccini, Aldo R.; Fabry, Ben
    In Biomaterials Science, 2021. [bibtex] [pdf] [doi]
  • Bioprinting and Differentiation of Adipose-Derived Stromal Cell Spheroids for a 3D Breast Cancer-Adipose Tissue Model
    Horder, H.; Guaza Lasheras, M.; Grummel, N.; Nadernezhad, A.; Herbig, J.; Ergun, S.; Tessmar, J.; Groll, J.; Fabry, B.; Bauer-Kreisel, P.; Blunk, T.
    In Cells, volume 10, number 4, 2021. [bibtex] [pdf] [doi]
  • An Interactive Framework for Teaching Viscoelastic Modeling
    Kah, Delf; Fabry, Ben; Gerum, Richard C.
    In The Biophysicist, volume 2, number 3, pp. 18–28, 2021. [bibtex] [pdf] [doi]
  • A low-cost uniaxial cell stretcher for six parallel wells
    Kah, Delf; Winterl, Alexander; Přechová, Magdalena; Schöler, Ulrike; Schneider, Werner; Friedrich, Oliver; Gregor, Martin; Fabry, Ben
    In HardwareX, volume 9, pp. e00162, 2021. [bibtex] [pdf] [doi]
  • Plectin ensures intestinal epithelial integrity and protects colon against colitis
    Krausova, Alzbeta; Buresova, Petra; Sarnova, Lenka; Oyman-Eyrilmez, Gizem; Skarda, Jozef; Wohl, Pavel; Bajer, Lukas; Sticova, Eva; Bartonova, Lenka; Pacha, Jiri; Koubkova, Gizela; Prochazka, Jan; Spörrer, Marina; Dürrbeck, Christopher; Stehlikova, Zuzana; Vit, Martin; Ziolkowska, Natalia; Sedlacek, Radislav; Jirak, Daniel; Kverka, Miloslav; Wiche, Gerhard; Fabry, Ben; Korinek, Vladimir; Gregor, Martin
    In Mucosal Immunology, volume 14, number 3, pp. 691–702, 2021. [bibtex] [pdf] [doi]
  • Detecting long-range interactions between migrating cells
    Metzner, C.; Hörsch, F.; Mark, C.; Czerwinski, T.; Winterl, A.; Voskens, C.; Fabry, B.
    In Scientific Reports, volume 11, number 1, pp. 15031, 2021. [bibtex] [pdf] [doi]
2020

2020

  • High-Force Magnetic Tweezers with Hysteresis-Free Force Feedback
    Kah, Delf; Dürrbeck, Christopher; Schneider, Werner; Fabry, Ben; Gerum, Richard Carl
    In Biophysical Journal, volume 119, number 1, pp. 15–23, 2020. [bibtex] [pdf] [doi]
  • Collective forces of tumor spheroids in three-dimensional biopolymer networks
    Mark, Christoph; Grundy, Thomas J.; Strissel, Pamela L.; Böhringer, David; Grummel, Nadine; Gerum, Richard; Steinwachs, Julian; Hack, Carolin C.; Beckmann, Matthias W.; Eckstein, Markus; Strick, Reiner; O'Neill, Geraldine M.; Fabry, Ben
    In eLife, volume 9, pp. e51912, 2020. [bibtex] [pdf] [doi]
  • Cryopreservation impairs 3-D migration and cytotoxicity of natural killer cells
    Mark, Christoph; Czerwinski, Tina; Roessner, Susanne; Mainka, Astrid; Hörsch, Franziska; Heublein, Lucas; Winterl, Alexander; Sanokowski, Sebastian; Richter, Sebastian; Bauer, Nina; Angelini, Thomas E.; Schuler, Gerold; Fabry, Ben; Voskens, Caroline J.
    In Nature Communications, volume 11, number 1, pp. 5224, 2020. [bibtex] [pdf] [doi]
  • Flow and hydrodynamic shear stress inside a printing needle during biofabrication
    Muller, S. J.; Mirzahossein, E.; Iftekhar, E. N.; Bacher, C.; Schrufer, S.; Schubert, D. W.; Fabry, B.; Gekle, S.
    In PLoS One, volume 15, number 7, pp. e0236371, 2020. [bibtex] [pdf] [doi]
  • Measurement of Skeletal Muscle Fiber Contractility with High-Speed Traction Microscopy
    Rausch, M.; Bohringer, D.; Steinmann, M.; Schubert, D. W.; Schrufer, S.; Mark, C.; Fabry, B.
    In Biophys J, volume 118, number 3, pp. 657–666, 2020. [bibtex] [pdf] [doi]
  • Durotropic Growth of Pollen Tubes
    Reimann, Ronny; Kah, Delf; Mark, Christoph; Dettmer, Jan; Reimann, Theresa M.; Gerum, Richard C.; Geitmann, Anja; Fabry, Ben; Dietrich, Petra; Kost, Benedikt
    In Plant Physiology, volume 183, number 2, pp. 558, 2020. [bibtex] [pdf] [doi]
  • micrObs – A customizable time-lapse camera for ecological studies
    Winterl, Alexander; Richter, Sebastian; Houstin, Aymeric; Nesterova, Anna P.; Bonadonna, Francesco; Schneider, Werner; Fabry, Ben; Le Bohec, Céline; Zitterbart, Daniel P.
    In HardwareX, volume 8, pp. e00134, 2020. [bibtex] [pdf] [doi]
2019

2019

  • Breast cancer cells adapt contractile forces to overcome steric hindrance
    Cóndor, M.; Mark, C.; Gerum, R. C.; Grummel, N. C.; Bauer, A.; García-Aznar, J. M.; Fabry, B.
    In Biophysical Journal, volume 116, pp. 1305–1312, 2019. [bibtex] [pdf] [doi]
  • CameraTransform: A Python package for perspective corrections and image mapping
    Gerum, Richard C.; Richter, Sebastian; Winterl, Alexander; Mark, Christoph; Fabry, Ben; Le Bohec, Céline; Zitterbart, Daniel P.
    In SoftwareX, volume 10, pp. 100333, 2019. [bibtex] [pdf] [doi]
  • Anodic Titanium Dioxide Nanotubes for Magnetically Guided Therapeutic Delivery
    Hasanzadeh Kafshgari, M.; Kah, D.; Mazare, A.; Nguyen, N. T.; Distaso, M.; Peukert, W.; Goldmann, W. H.; Schmuki, P.; Fabry, B.
    In Sci Rep, volume 9, number 1, pp. 13439, 2019. [bibtex] [pdf] [doi]
  • Intracellular Drug Delivery with Anodic Titanium Dioxide Nanotubes and Nanocylinders
    Kafshgari, M. H.; Mazare, A.; Distaso, M.; Goldmann, W. H.; Peukert, W.; Fabry, B.; Schmuki, P.
    In ACS Appl Mater Interfaces, volume 11, number 16, pp. 14980–14985, 2019. [bibtex] [doi]
  • Imaging localized neuronal activity at fast time scales through biomechanics
    Patz, S.; Fovargue, D.; Schregel, K.; Nazari, N.; Palotai, M.; Barbone, P. E.; Fabry, B.; Hammers, A.; Holm, S.; Kozerke, S.; Nordsletten, D.; Sinkus, R.
    In Science Advances, volume 5, number 4, pp. –, 2019. [bibtex] [pdf] [doi]
  • Treatment of keratinocytes with 4-phenylbutyrate in epidermolysis bullosa: Lessons for therapies in keratin disorders
    Sporrer, Marina; Prochnicki, Ania; Tölle, Regine C.; Nyström, Alexander; Esser, Philipp R.; Homberg, Melanie; Athanasiou, Ioannis; Zingkou, Eleni; Schilling, Achim; Gerum, Richard; Thievessen, Ingo; Winter, Lilli; Bruckner-Tuderman, Leena; Fabry, Ben; Magin, Thomas M.; Dengjel, Jörn; Schröder, Rolf; Kiritsi, Dimitra
    In EBioMedicine, volume 44, pp. 502–515, 2019. [bibtex] [pdf] [doi]
2018

2018

  • Structural organisation and dynamics in king penguin colonies
    Gerum, R.C.; Richter, S.; Fabry, B.; Le Bohec, C.; Bonadonna, F.; Nesterova, A.; Zitterbart, D. P.
    In Journal of Physics D: Applied Physics, volume 51, number 16, pp. 164004, 2018. [bibtex] [pdf] [doi]
  • Bayesian model selection for complex dynamic systems
    Mark, C.; Metzner, C.; Lautscham, L.; Strissel, P. L.; Strick, R.; Fabry, B.
    In Nat Commun, volume 9, number 1, pp. 1803, 2018. [bibtex] [pdf] [doi]
  • Pressure-driven collective growth mechanism of planar cell colonies
    Metzner, C.; Lange, J.; Krauss, P.; Wunderling, N.; Ubelacker, J.; Martin, F.; Fabry, B.
    In Journal of Physics D-Applied Physics, volume 51, number 30, 2018. [bibtex] [pdf] [doi]
  • Phase transitions in huddling emperor penguins
    Richter, S.; Gerum, R.; Winterl, A.; Houstin, A.; Seifert, M.; Peschel, J.; Fabry, B.; Le Bohec, C.; Zitterbart, D. P.
    In Journal of Physics D-Applied Physics, volume 51, number 21, 2018. [bibtex] [pdf] [doi]
  • A remote‐controlled observatory for behavioural and ecological research: A case study on emperor penguins
    Richter, S.; Gerum, R. C.; Schneider, W.; Fabry, B.; Le Bohec, C.; Zitterbart, D. P.
    In Methods in Ecology and Evolution, volume 0, number 0, 2018. [bibtex] [pdf] [doi]
  • NR4A1 Regulates Motility of Osteoclast Precursors and Serves as Target for the Modulation of Systemic Bone Turnover
    Scholtysek, C.; Ipseiz, N.; Bohm, C.; Krishnacoumar, B.; Stenzel, M.; Czerwinski, T.; Palumbo-Zerr, K.; Rothe, T.; Weidner, D.; Klej, A.; Stoll, C.; Distler, J.; Tuckermann, J.; Herrmann, M.; Fabry, B.; Goldmann, W. H.; Schett, G.; Kronke, G.
    In J Bone Miner Res, volume 33, number 11, pp. 2035–2047, 2018. [bibtex] [pdf] [doi]
2017

2017

  • The focal adhesion targeting domain of p130Cas confers a mechanosensing function
    Bradbury, P. M.; Turner, K.; Mitchell, C.; Griffin, K. R.; Middlemiss, S.; Lau, L.; Dagg, R.; Taran, E.; Cooper-White, J.; Fabry, B.; O'Neill, G. M.
    In J Cell Sci, volume 130, number 7, pp. 1263–1273, 2017. [bibtex] [pdf] [doi]
  • The role of focal adhesion anchoring domains of CAS in mechanotransduction
    Branis, J.; Pataki, C.; Sporrer, M.; Gerum, R. C.; Mainka, A.; Cermak, V.; Goldmann, W. H.; Fabry, B.; Brabek, J.; Rosel, D.
    In Sci Rep, volume 7, pp. 46233, 2017. [bibtex] [pdf] [doi]
  • Traction Force Microscopy in 3-Dimensional Extracellular Matrix Networks
    Condor, M.; Steinwachs, J.; Mark, C.; Garcia-Aznar, J. M.; Fabry, B.
    In Curr Protoc Cell Biol, volume 75, pp. 10 22 1–10 22 20, 2017. [bibtex] [pdf] [doi]
  • Early signs of architectural and biomechanical failure in isolated myofibers and immortalized myoblasts from desmin-mutant knock-in mice
    Diermeier, S.; Iberl, J.; Vetter, K.; Haug, M.; Pollmann, C.; Reischl, B.; Buttgereit, A.; Schurmann, S.; Sporrer, M.; Goldmann, W. H.; Fabry, B.; Elhamine, F.; Stehle, R.; Pfitzer, G.; Winter, L.; Clemen, C. S.; Herrmann, H.; Schroder, R.; Friedrich, O.
    In Sci Rep, volume 7, number 1, pp. 1391, 2017. [bibtex] [pdf] [doi]
  • Adaptive stochastic resonance for unknown and variable input signals
    Krauss, P.; Metzner, C.; Schilling, A.; Schutz, C.; Tziridis, K.; Fabry, B.; Schulze, H.
    In Sci Rep, volume 7, number 1, pp. 2450, 2017. [bibtex] [pdf] [doi]
  • Unbiased High-Precision Cell Mechanical Measurements with Microconstrictions
    Lange, J. R.; Metzner, C.; Richter, S.; Schneider, W.; Spermann, M.; Kolb, T.; Whyte, G.; Fabry, B.
    In Biophys J, volume 112, number 7, pp. 1472–1480, 2017. [bibtex] [pdf] [doi]
2016

2016

  • Mechanical plasticity of cells
    Bonakdar, N.; Gerum, R.; Kuhn, M.; Sporrer, M.; Lippert, A.; Schneider, W.; Aifantis, K. E.; Fabry, B.
    In Nat Mater, volume 15, number 10, pp. 1090–4, 2016. [bibtex] [pdf] [doi]
  • ATRA mechanically reprograms pancreatic stellate cells to suppress matrix remodelling and inhibit cancer cell invasion
    Chronopoulos, A.; Robinson, B.; Sarper, M.; Cortes, E.; Auernheimer, V.; Lachowski, D.; Attwood, S.; Garcia, R.; Ghassemi, S.; Fabry, B.; Del Rio Hernandez, A.
    In Nat Commun, volume 7, pp. 12630, 2016. [bibtex] [pdf] [doi]
  • N-cadherin-functionalized polymer-tethered multi-bilayer: a cell surface-mimicking substrate to probe cellular mechanosensitivity
    Ge, Y.; Lin, Y. H.; Lautscham, L. A.; Goldmann, W. H.; Fabry, B.; Naumann, C. A.
    In Soft Matter, volume 12, number 40, pp. 8274–8284, 2016. [bibtex] [pdf] [doi]
  • ClickPoints: an expandable toolbox for scientific image annotation and analysis
    Gerum, R. C.; Richter, S.; Fabry, B.; Zitterbart, D. P.
    In Methods in Ecology and Evolution, 2016. [bibtex] [pdf] [doi]
  • Differential response of patient-derived primary glioblastoma cells to environmental stiffness
    Grundy, T. J.; De Leon, E.; Griffin, K. R.; Stringer, B. W.; Day, B. W.; Fabry, B.; Cooper-White, J.; O'Neill, G. M.
    In Sci Rep, volume 6, pp. 23353, 2016. [bibtex] [pdf] [doi]
  • The IsoStretcher: An isotropic cell stretch device to study mechanical biosensor pathways in living cells
    Schurmann, S.; Wagner, S.; Herlitze, S.; Fischer, C.; Gumbrecht, S.; Wirth-Hucking, A.; Prolss, G.; Lautscham, L. A.; Fabry, B.; Goldmann, W. H.; Nikolova-Krstevski, V.; Martinac, B.; Friedrich, O.
    In Biosens Bioelectron, volume 81, pp. 363–72, 2016. [bibtex] [pdf] [doi]
  • Three-dimensional force microscopy of cells in biopolymer networks
    Steinwachs, J.; Metzner, C.; Skodzek, K.; Lang, N.; Thievessen, I.; Mark, C.; Munster, S.; Aifantis, K. E.; Fabry, B.
    In Nat Methods, volume 13, number 2, pp. 171–6, 2016. [bibtex] [pdf] [doi]
  • Cell Adhesion on Surface-Functionalized Magnesium
    Wagener, V.; Schilling, A.; Mainka, A.; Hennig, D.; Gerum, R.; Kelch, M. L.; Keim, S.; Fabry, B.; Virtanen, S.
    In ACS Appl Mater Interfaces, volume 8, number 19, pp. 11998–2006, 2016. [bibtex] [pdf] [doi]
2015

2015

  • Vinculin phosphorylation at residues Y100 and Y1065 is required for cellular force transmission
    Auernheimer, V.; Lautscham, L. A.; Leidenberger, M.; Friedrich, O.; Kappes, B.; Fabry, B.; Goldmann, W. H.
    In J Cell Sci, volume 128, number 18, pp. 3435–43, 2015. [bibtex] [pdf] [doi]
  • Determining the mechanical properties of plectin in mouse myoblasts and keratinocytes
    Bonakdar, N.; Schilling, A.; Sporrer, M.; Lennert, P.; Mainka, A.; Winter, L.; Walko, G.; Wiche, G.; Fabry, B.; Goldmann, W. H.
    In Exp Cell Res, pp. 331–337, 2015. [bibtex] [pdf] [doi]
  • Activation and regulation of endogenous retroviral genes in the human pituitary gland and related endocrine tumours
    Buslei, R.; Strissel, P. L.; Henke, C.; Schey, R.; Lang, N.; Ruebner, M.; Stolt, C. C.; Fabry, B.; Buchfelder, M.; Strick, R.
    In Neuropathol Appl Neurobiol, volume 41, number 2, pp. 180–200, 2015. [bibtex] [pdf] [doi]
  • Emergence of Asynchronous Local Clocks in Excitable Media
    Gerum, R. C.; Fabry, B.; Metzner, C.
    In PLoS One, volume 10, number 11, pp. e0142490, 2015. [bibtex] [pdf] [doi]
  • Imaging viscoelastic properties of living cells by AFM: Power-law rheology on the nanoscale
    Hecht, F.M.; Rheinlaender, J.; Schierbaum, N.; Goldmann, W. H.; Fabry, B.; Schäffer, T.E.
    In Soft Matter, volume 11, pp. 4553–4732, 2015. [bibtex] [pdf]
  • Biphasic response of cell invasion to matrix stiffness in three-dimensional biopolymer networks
    Lang, N. R.; Skodzek, K.; Hurst, S.; Mainka, A.; Steinwachs, J.; Schneider, J.; Aifantis, K. E.; Fabry, B.
    In Acta Biomater, volume 13, pp. 61–7, 2015. [bibtex] [pdf] [doi]
  • Microconstriction Arrays for High-Throughput Quantitative Measurements of Cell Mechanical Properties
    Lange, J. R.; Steinwachs, J.; Kolb, T.; Lautscham, L. A.; Harder, I.; Whyte, G.; Fabry, B.
    In Biophys J, volume 109, number 1, pp. 26–34, 2015. [bibtex] [pdf] [doi]
  • Migration in Confined 3D Environments Is Determined by a Combination of Adhesiveness, Nuclear Volume, Contractility, and Cell Stiffness
    Lautscham, L. A.; Kammerer, C.; Lange, J. R.; Kolb, T.; Mark, C.; Schilling, A.; Strissel, P. L.; Strick, R.; Gluth, C.; Rowat, A. C.; Metzner, C.; Fabry, B.
    In Biophys J, volume 109, number 5, pp. 900–13, 2015. [bibtex] [pdf] [doi]
  • Stress controls the mechanics of collagen networks
    Licup, A. J.; Munster, S.; Sharma, A.; Sheinman, M.; Jawerth, L. M.; Fabry, B.; Weitz, D. A.; MacKintosh, F. C.
    In Proc Natl Acad Sci U S A, volume 112, number 31, pp. 9573–8, 2015. [bibtex] [pdf] [doi]
  • Superstatistical analysis and modelling of heterogeneous random walks
    Metzner, C.; Mark, C.; Steinwachs, J.; Lautscham, L.; Stadler, F.; Fabry, B.
    In Nat Comm, volume 6, pp. 7516, 2015. [bibtex] [pdf] [doi]
  • Mechanotransduction: use the force(s)
    Paluch, E. K.; Nelson, C. M.; Biais, N.; Fabry, B.; Moeller, J.; Pruitt, B. L.; Wollnik, C.; Kudryasheva, G.; Rehfeldt, F.; Federle, W.
    In BMC Biol, volume 13, pp. 47, 2015. [bibtex] [pdf] [doi]
  • Alginate-based hydrogels with improved adhesive properties for cell encapsulation
    Sarker, B.; Rompf, J.; Silva, R.; Lang, N.; Detsch, R.; Kaschta, J.; Fabry, B.; Boccaccini, A. R.
    In Int J Biol Macromol, volume 78, pp. 72–8, 2015. [bibtex] [pdf] [doi]
  • Vinculin is required for cell polarization, migration, and extracellular matrix remodeling in 3D collagen
    Thievessen, I.; Fakhri, N.; Steinwachs, J.; Kraus, V.; McIsaac, R. S.; Gao, L.; Chen, B. C.; Baird, M. A.; Davidson, M. W.; Betzig, E.; Oldenbourg, R.; Waterman, C. M.; Fabry, B.
    In FASEB J, volume 29, number 11, pp. 4555–67, 2015. [bibtex] [pdf] [doi]
  • In-Vivo Imaging of Cell Migration Using Contrast Enhanced MRI and SVM Based Post-Processing
    Weis, C.; Hess, A.; Budinsky, L.; Fabry, B.
    In PLoS One, volume 10, number 12, pp. e0140548, 2015. [bibtex] [pdf] [doi]
2014

2014

  • Behavior of Encapsulated MG-63 Cells in RGD and Gelatine-Modified Alginate Hydrogels
    Grigore, A.; Sarker, B.; Fabry, B.; Boccaccini, A. R.; Detsch, R.
    In Tissue Eng Part A, 2014. [bibtex] [pdf] [doi]
  • CAS directly interacts with vinculin to control mechanosensing and focal adhesion dynamics
    Janostiak, R.; Brabek, J.; Auernheimer, V.; Tatarova, Z.; Lautscham, L. A.; Dey, T.; Gemperle, J.; Merkel, R.; Goldmann, W. H.; Fabry, B.; Rosel, D.
    In Cell Mol Life Sci, volume 71, number 4, pp. 727–744, 2014. [bibtex] [pdf] [doi]
  • Biomembrane-mimicking lipid bilayer system as a mechanically tunable cell substrate
    Lautscham, L. A.; Lin, C. Y.; Auernheimer, V.; Naumann, C. A.; Goldmann, W. H.; Fabry, B.
    In Biomaterials, volume 35, number 10, pp. 3198–207, 2014. [bibtex] [pdf] [doi]
  • Bayesian inference of time varying parameters in autoregressive processes
    Mark, C.; Metzner, C.; Fabry, B.
    In arXiv:1405.1668, 2014. [bibtex] [pdf]
  • Fibrous protein-based hydrogels for cell encapsulation
    Silva, R.; Fabry, B.; Boccaccini, A. R.
    In Biomaterials, volume 35, number 25, pp. 6727–6738, 2014. [bibtex] [pdf] [doi]
  • Are environmental factors responsible for changed breeding behaviour in emperor penguins?
    Zitterbart, D.; S., Richter; G., Spiekermann; LK., Behrens; J., Regnery; RP., Fontes; T., Hänssler; König-Langlo, G.; Weller, R.; Fabry, B.
    In Antarctic Science, 2014. [bibtex] [pdf] [doi]
2013

2013

  • Quantifying cell-to-cell variation in power-law rheology
    Cai, P.; Mizutani, Y.; Tsuchiya, M.; Maloney, J. M.; Fabry, B.; Van Vliet, K. J.; Okajima, T.
    In Biophys J, volume 105, number 5, pp. 1093–102, 2013. [bibtex] [pdf] [doi]
  • The origin of traveling waves in an emperor penguin huddle
    Gerum, R.C.; Fabry, B.; Metzner, C.; Beaulieu, M.; Ancel, A.; Zitterbart, D.P.
    In News J Phys, volume 35, 2013. [bibtex] [pdf]
  • Vinculin, cell mechanics and tumour cell invasion
    Goldmann, W. H.; Auernheimer, V.; Thievessen, I.; Fabry, B.
    In Cell Biol Int, volume 37, number 5, pp. 397–405, 2013. [bibtex] [pdf] [doi]
  • Identification of DAPK as a scaffold protein for the LIMK/cofilin complex in TNF-induced apoptosis
    Ivanovska, J.; Tregubova, A.; Mahadevan, V.; Chakilam, S.; Gandesiri, M.; Benderska, N.; Ettle, B.; Hartmann, A.; Soder, S.; Ziesche, E.; Fischer, T.; Lautscham, L.; Fabry, B.; Segerer, G.; Gohla, A.; Schneider-Stock, R.
    In Int J Biochem Cell Biol, volume 45, number 8, pp. 1720–9, 2013. [bibtex] [pdf] [doi]
  • Acquisition of paclitaxel resistance is associated with a more aggressive and invasive phenotype in prostate cancer
    Kim, J. J.; Yin, B.; Christudass, C. S.; Terada, N.; Rajagopalan, K.; Fabry, B.; Lee, D. Y.; Shiraishi, T.; Getzenberg, R. H.; Veltri, R. W.; An, S. S.; Mooney, S. M.
    In J Cell Biochem, volume 114, number 6, pp. 1286–93, 2013. [bibtex] [pdf] [doi]
  • Estimating the 3D pore size distribution of biopolymer networks from directionally biased data
    Lang, N.R.; Muenster, S.; Metzner, C.; Krauss, K.; Schuermann, S.; Lange, J.; Aifantis, K.E.; Friedrich, O.; Fabry, B.
    In Biophys J, volume 105, pp. 1967–1975, 2013. [bibtex] [pdf]
  • Cell and tissue mechanics in cell migration
    Lange, J. R.; Fabry, B.
    In Exp Cell Res, volume 319, number 16, pp. 2418–23, 2013. [bibtex] [pdf] [doi]
  • Mechanosensing of Cells in Laminin-Fuctionalized Biomembrane-Mimicking Substrates
    Lautscham, L.; Yu-Hung Lin, C.; Auernheimer, V.; Minner, D.; Goldmann, W. H.; Naumann, C. A.; Fabry, B.
    In Biophysical Journal, volume 104, number 2, Supplement 1, pp. 319a, 2013. [bibtex] [pdf] [doi]
  • A simplified implementation of the bubble analysis of biopolymer network pores
    Munster, S.; Fabry, B.
    In Biophys J, volume 104, number 12, pp. 2774–5, 2013. [bibtex] [pdf] [doi]
  • Strain history dependence of the nonlinear stress response of fibrin and collagen networks
    Munster, S.; Jawerth, L. M.; Leslie, B. A.; Weitz, J. I.; Fabry, B.; Weitz, D. A.
    In Proc Natl Acad Sci U S A, volume 110, number 30, pp. 12197–202, 2013. [bibtex] [pdf] [doi]
  • Structure and mechanics of fibrin clots formed under mechanical perturbation
    Munster, S.; Jawerth, L. M.; Fabry, B.; Weitz, D. A.
    In J Thromb Haemost, volume 11, number 3, pp. 557–60, 2013. [bibtex] [pdf] [doi]
  • Labeling of cancer cells with magnetic nanoparticles for magnetic resonance imaging
    Weis, C.; Blank, F.; West, A.; Black, G.; Woodward, R. C.; Carroll, M. R.; Mainka, A.; Kartmann, R.; Brandl, A.; Bruns, H.; Hallam, E.; Shaw, J.; Murphy, J.; Teoh, W. Y.; Aifantis, K. E.; Amal, R.; House, M.; Pierre, T. S.; Fabry, B.
    In Magn Reson Med, 2013. [bibtex] [pdf] [doi]
2012

2012

  • Biomechanical characterization of a desminopathy in primary human myoblasts
    Bonakdar, N; J., Luczak; Lautscham, L.; Czonstke, M.; Koch, T.M.; Mainka, A.; Jungbauer, T.; Goldmann, W.H.; Schröder, R.; Fabry, B.
    In Biochem Biophys Res Commun, volume 419, number 4, pp. 703–7, 2012. [bibtex] [pdf] [doi]
  • Occupy tissue: the movement in cancer metastasis
    Bradbury, P.; Fabry, B.; O'Neill, G. M.
    In Cell Adh Migr, volume 6, number 5, pp. 424–32, 2012. [bibtex] [pdf] [doi]
  • Inhibition of Rho kinases increases directional motility of microvascular endothelial cells
    Breyer, J.; Samarin, J.; Rehm, M.; Lautscham, L.; Fabry, B.; Goppelt-Struebe, M.
    In Biochem Pharmacol, volume 83, number 5, pp. 616–26, 2012. [bibtex] [pdf]
  • 3D Traction Forces in Cancer Cell Invasion
    Koch, T.M.; Muenster, S.; Bonakdar, N.; Buttler, J.P.; Fabry, B.
    In PloS One, volume 7, number 3, pp. e33476, 2012. [bibtex] [pdf]
  • Parameter-Free Binarization and Skeletonization of Fiber Networks from Confocal Image Stacks
    Krauss, P.; Metzner, C.; Lange, J.; Lang, N.; Fabry, B.
    In PLoS ONE, volume 7, number 5, pp. e36575 pp.1–8, 2012. [bibtex] [pdf]
  • Akt and p53 are potential mediators of reduced mammary tumor growth by Chloroquine and the mTOR inhibitor RAD001
    Loehberg, C. R.; Strissel, P. L.; Dittrich, R.; Strick, R.; Dittmer, J.; Dittmer, A.; Fabry, B.; Kalender, W. A.; Koch, T.; Wachter, D. L.; Groh, N.; Polier, A.; Brandt, I.; Lotz, L.; Hoffmann, I.; Koppitz, F.; Oeser, S.; Mueller, A.; Fasching, P. A.; Lux, M. P.; Beckmann, M. W.; Schrauder, M. G.
    In Biochem Pharmacol, volume 83, number 4, pp. 480–8, 2012. [bibtex] [pdf]
  • NEDD9 stabilizes focal adhesions, increases binding to the extra-cellular matrix and differentially effects 2D versus 3D cell migration
    Zhong, J.; Baquiran, J. B.; Bonakdar, N.; Lees, J.; Ching, Y. W.; Pugacheva, E.; Fabry, B.; O'Neill, G. M.
    In PLoS One, volume 7, number 4, pp. e35058, 2012. [bibtex] [pdf]
2011

2011

  • Head/tail interaction of vinculin influences cell mechanical behavior
    Diez, G.; Auernheimer, V.; Fabry, B.; Goldmann, W. H.
    In Biochem Biophys Res Commun, volume 406, number 1, pp. 85–8, 2011. [bibtex] [pdf]
  • Focal Adhesion Kinase Stabilizes the Cytoskeleton
    Fabry, B.; Klemm, A.; Kienle, S.; Schäffer, T.E.; Goldmann, W. H.
    In Biophys J, volume 101, pp. 2131–2138, 2011. [bibtex] [pdf]
  • Calcium imaging in the optical stretcher
    Gyger, M.; Rose, D.; Stange, R.; Kießling, T.; Zink, M.; Fabry, B.; Käs, J. A.
    In OPTICS EXPRESS, volume 19, number 20, pp. 19212–19222, 2011. [bibtex] [pdf]
  • Control of magnesium corrosion and biocompatibility with biomimetic coatings
    Keim, S.; Brunner, J. G.; Fabry, B.; Virtanen, S.
    In J Biomed Mater Res B Appl Biomater, volume 96, number 1, pp. 84–90, 2011. [bibtex] [pdf]
  • Linear and Nonlinear Rheology of Living Cells
    Kollmannsberger, P.; Fabry, B.
    In Annu Rev Mater Res, volume 41, pp. 75–97, 2011. [bibtex] [pdf]
  • Nonlinear viscoelasticity of adherent cells is controlled by cytoskeletal tension
    Kollmannsberger, P.; Mierke, C.T.; Fabry, B.
    In Soft Matter, volume 7, pp. 3127–3132, 2011. [bibtex] [pdf]
  • Integrin adhesion and force coupling are independently regulated by localized PtdIns(4,5)2 synthesis
    Legate, K. R.; Takahashi, S.; Bonakdar, N.; Fabry, B.; Boettiger, D.; Zent, R.; Fassler, R.
    In Embo J, volume 30, number 22, pp. 4539–53, 2011. [bibtex] [pdf]
  • Poresizes in random line networks
    Metzner, C.; Krauss, P.; Fabry, B.
    In arXiv:1110.1803v1, 2011. [bibtex]
  • Coordinated movements prevent jamming in an Emperor penguin huddle
    Zitterbart DP, Wienecke B, Butler JP, Fabry B
    In PloS One, volume 6, pp. e20260, 2011. [bibtex] [pdf]
2010

2010

  • The role of the tissue microenvironment in the regulation of cancer cell motility and invasion
    Brabek, J.; Mierke, C. T.; Rosel, D.; Vesely, P.; Fabry, B.
    In Cell Commun Signaling, 2010. [bibtex] [pdf]
  • Anodic mesoporous TiO(2) layer on Ti for enhanced formation of biomimetic hydroxyapatite
    Dey, T.; Roy, P.; Fabry, B.; Schmuki, P.
    In Acta Biomater, 2010. [bibtex] [pdf]
  • Fluctuations of cytoskeleton-bound microbeads - the effect of bead-receptor binding dynamics
    Metzner, C.; Raupach, C.; Mierke, C. T.; Fabry, B.
    In J Phys Condens Matter, volume 22, pp. 194105, 2010. [bibtex] [pdf]
  • Integrin alpha5beta1 facilitates cancer cell invasion through enhanced contractile forces
    Mierke, C. T.; Frey, B.; Fellner, M.; Herrmann, M.; Fabry, B.
    In J Cell Sci, volume 124, number Pt 3, pp. 369–83, 2010. [bibtex] [pdf]
  • Vinculin facilitates cell invasion into three-dimensional collagen matrices
    Mierke, C. T.; Kollmannsberger, P.; Zitterbart, D. P.; Diez, G.; Koch, T. M.; Marg, S.; Ziegler, W. H.; Goldmann, W. H.; Fabry, B.
    In J Biol Chem, volume 285, number 17, pp. 13121–30, 2010. [bibtex] [pdf]
  • Size-selective separation of macromolecules by nanochannel titania membrane with self-cleaning (declogging) ability
    Roy, P.; Dey, T.; Lee, K.; Kim, D.; Fabry, B.; Schmuki, P.
    In J Am Chem Soc, volume 132, number 23, pp. 7893–5, 2010. [bibtex] [pdf]
  • Pulling it together in three dimensions
    Trepat, X.; Fabry, B.; Fredberg, J. J.
    In Nat Methods, volume 7, number 12, pp. 963–5, 2010. [bibtex] [pdf]
2009

2009

  • Anchorage of vinculin to lipid membranes influences cell mechanical properties
    Diez, G.; Kollmannsberger, P.; Mierke, C. T.; Koch, T. M; Vali, H.; Fabry, B.; Goldmann, W. H.
    In Biophys J, volume 97, pp. 3105–3112, 2009. [bibtex] [pdf]
  • A Blind Spot in Confocal Reflection Microscopy: The Dependence of Fiber Brightness on Fiber Orientation in Imaging Biopolymer Networks
    Jawerth, L. M.; Münster, S.; Vader, D. A.; Fabry, B.; Weitz, D. A.
    In Biophys J, volume 98, pp. L01–L03, 2009. [bibtex] [pdf]
  • Filamin A is essential for active cell stiffening but not passive stiffening under external force
    Kasza, K. E.; Nakamura, F.; Hu, S.; Kollmannsberger, P. Bonakdar, N.; Fabry, B.; Stossel, T. P.; Wang, N.; Weitz, D. A.
    In Biophys J, volume 96, pp. 4326–4335, 2009. [bibtex] [pdf]
  • Active soft glassy rheology of adherent cells
    Kollmannsberger, P.; Fabry, B.
    In Soft Matter RSC, volume 5, pp. 1771–74, 2009. [bibtex] [pdf]
  • Effect of surface pre-treatments on biocompatibility of magnesium
    Lorenz, C.; Brunner, J. G.; Kollmannsberger, P.; Jaafar, L.; Fabry, B.; Virtanen, S.
    In Acta Biomater, volume 5, number 7, pp. 2783–9, 2009. [bibtex] [pdf]
  • Noise and critical phenomena in biochemical signaling cycles at small molecule numbers
    Metzner, C.; Sajitz-Hermstein, M.; Schmidberger, M.; Fabry, B.
    In Phys Rev E, volume 80, pp. 021915, 2009. [bibtex] [pdf]
  • Single-cell response to stiffness exhibits muscle-like behavior
    Mitrossilis, D.; Fouchard, J.; Guiroy, A.; Desprat, N.; Rodriguez, N.; Fabry, B.; Asnacios, A.
    In Proc Natl Acad Sci U S A, volume 106, number 43, pp. 18243–8, 2009. [bibtex] [pdf]
  • Neutrophil morphology and migration are affected by substrate elasticity
    Oakes, P. W.; Patel, D. C.; Morin, N. A.; Zitterbart, D. P.; Fabry, B.; Reichner, J. S.; Tang, J. X.
    In Blood, volume 114, number 7, pp. 1387–95, 2009. [bibtex] [pdf]
2008

2008

  • Hydrodynamic thickening of lubricating fluid layer beneath sliding mesothelial tissues
    Lin, J. L.; Moghani, T.; Fabry, B.; Butler, J. P.; Loring, S. H.
    In J Biomech, volume 41, number 6, pp. 1197–205, 2008. [bibtex] [pdf]
  • Robust Pore Size Analysis of Filamentous Networks From 3D Confocal Microscopy
    Mickel, W.; Muenster, S.; Jawerth, L. M.; Vader, D. A.; Weitz, D. A.; Sheppard, A. P.; Mecke, K.; Fabry, B.; Schroeder-Turk, G.
    In Biophys J, volume 95, pp. 6072–80, 2008. [bibtex] [pdf]
  • Breakdown of the endothelial barrier function in tumor cell transmigration
    Mierke, C. T.; Zitterbart, D. P.; Kollmannsberger, P.; Raupach, C.; Schlotzer-Schrehardt, U.; Goecke, T. W.; Behrens, J.; Fabry, B.
    In Biophys J, volume 94, number 7, pp. 2832–46, 2008. [bibtex] [pdf]
  • Contractile forces in tumor cell migration
    Mierke, C. T.; Rosel, D.; Fabry, B.; Brabek, J.
    In Eur J Cell Biol, volume 87, number 8-9, pp. 669–76, 2008. [bibtex] [pdf]
  • Mechano-coupling and regulation of contractility by the vinculin tail domain.
    Mierke, C. T.; Kollmannsberger, P.; Paranhos-Zitterbart, D.; Smith, J.; Fabry, B.; Goldmann, W. H.
    In Biophys J, volume 94, number 2, pp. 661–70, 2008. [bibtex] [pdf]
  • Up-regulation of Rho/ROCK Signaling in Sarcoma Cells Drives Invasion and Increased Generation of Protrusive Forces
    Rösel, D.; Brabek, J.; Tolde, O.; Mierke, C. T.; Zitterbart, D. P.; Raupach, C.; Bicanova, K.; Kollmannsberger, P.; Pankova, D.; Vesely, P.; Folk, P.; Fabry, B.
    In Mol Cancer Res, volume 6, number 9, pp. 1410–20, 2008. [bibtex] [pdf]
  • CD24 induces localization of beta1 integrin to lipid raft domains
    Runz, S.; Mierke, C. T.; Joumaa, S.; Behrens, J.; Fabry, B.; Altevogt, P.
    In Biochem Biophys Res Commun, volume 365, number 1, pp. 35–41, 2008. [bibtex] [pdf]
  • Magnetically Guided Titania Nanotubes for Site-Selective Photocatalysis and Drug Release
    Shrestha, N. K.; Macak, J. M.; Schmidt-Stein, F.; Hahn, R.; Mierke, C. T.; Fabry, B.; Schmuki, P.
    In Angewandte Chemie, volume 120, pp. 1–5, 2008. [bibtex] [pdf]
2007

2007

  • Cytoskeleton dynamics: Fluctuations within the network
    Bursac, P.; Fabry, B.; Trepat, X.; Lenormand, G.; Butler, J. P.; Wang, N.; Fredberg, J. J.; An, S. S.
    In Biochem Biophys Res Commun, volume 355, pp. 324–30, 2007. [bibtex] [pdf]
  • Mechanotransduction, asthma, and airway smooth muscle
    Fabry, B.; Fredberg, J. J.
    In Drug Discovery Today, volume 4, number 3, pp. 131–37, 2007. [bibtex] [pdf]
  • High-Force Magnetic Tweezers with Force Feedback for Biological Applications
    Kollmannsberger, P.; Fabry, B.
    In Rev Sci Instrum, volume 78, pp. 114301–1–6, 2007. [bibtex] [pdf]
  • Simple model of cytoskeletal fluctuations
    Metzner, C.; Raupach, C.; Paranhos Zitterbart, D.; Fabry, B.
    In Phys Rev E, volume 76, number 021925, pp. 021925–1–12, 2007. [bibtex] [pdf]
  • Airway Hyperresponsiveness, Remodeling, and Smooth Muscle Mass: Right Answer, Wrong Reason?
    Oliver, M. N.; Fabry, B.; Marinkovic, A.; Mijailovich, S. M.; Butler, J. P.; Fredberg, J. J.
    In Am J Respir Cell Mol Biol, volume 37, number 3, pp. 264–72, 2007. [bibtex] [pdf]
  • Stress fluctuations and motion of cytoskeletal-bound markers
    Raupach, C.; Zitterbart, D. P.; Mierke, C. T.; Metzner, C.; Muller, F. A.; Fabry, B.
    In Phys Rev E Stat Nonlin Soft Matter Phys, volume 76, number 1 Pt 1, pp. 011918, 2007. [bibtex] [pdf]
  • Airway smooth muscle dynamics: a common pathway of airway obstruction in asthma
    Seow, C. Y.; An, S. S.; Bai, T. R.; Bates, J. H. T.; Black, J. L.; Brown, R. H.; Brusasco, V.; Chitano, P.; Deng, L.; Dowell, M.; Eidelmann, D. H.; Fabry, B.; Fairbank, N. J.; Ford, L. E.; Fredberg, J. J.; Gerthoffer, W. T.; Gilbert, S. H.; Gosens, R.; Gunst, S. J.; Halayko, A. J.; Ingram, R. H.; Irvin, C. G.; James, A. L.; Janssen, L. J.; King, G. G.; Knight, D. A.; Lauzon, A. M.; Lakser, O. J.; Ludwig, M. S.; Lutchen, K. R.; Maksym, G. N.; Martin, J. G.; Mauad, T.; McParland, B. E.; Mijailovich, S. M.; Mitchell, H. W.; Mitchell, R. W.; Mitzner, W.; Murphy, T. M.; Paré, P. D.; Pellegrino, R.; Sanderson, M. J.; Schellenberg, R. R.; Silveira, P. S. P.; Smith, P. G.; Solway, J.; Stephens, N. L.; Sterk, P. J.; Stewart, A. G.; Tang, D. D.; Tepper, R. S.; Tran, T.; Wang, L.
    In Eur Respir J, volume 29, number 5, pp. 834–60, 2007. [bibtex] [pdf]
2006

2006

  • Do biophysical properties of the airway smooth muscle in culture predict airway hyperresponsiveness?
    An, S. S.; Fabry, B.; Trepat, X.; Wang, N.; Fredberg, J. J.
    In Am J Respir Cell Mol Biol, volume 35, number 1, pp. 55–64, 2006. [bibtex] [pdf]
  • The cytoskeleton as a soft glassy material. In: Cytoskeletal Mechanics: Models and Measurements.
    Fredberg, J. J.; Fabry, B.
    2006. [bibtex] [pdf]
2005

2005

  • Cytoskeletal remodelling and slow dynamics in the living cell
    Bursac, P.; Lenormand, G.; Fabry, B.; Oliver, M.; Weitz, D. A.; Viasnoff, V.; Butler, J. P.; Fredberg, J. J.
    In Nat Mater, volume 4, number 7, pp. 557–61, 2005. [bibtex] [pdf]
  • Rat airway smooth muscle cell during actin modulation: rheology and glassy dynamics
    Laudadio, R. E.; Millet, E. J.; Fabry, B.; An, S. S.; Butler, J. P.; Fredberg, J. J.
    In Am J Physiol Cell Physiol, volume 289, number 6, pp. C1388–95, 2005. [bibtex] [pdf]
2004

2004

  • Role of Heat Shock Protein 27 in Cytoskeletal Remodeling of the Airway Smooth Muscle Cell
    An, S. S.; Fabry, B.; Mellema, M.; Bursac, P.; Gerthoffer, W. T.; Kayyali, U. S.; Gaestel, M.; Shore, S. S.; Fredberg, J. J.
    In J Appl Physiol, volume 96, number 5, pp. 1701–1713, 2004. [bibtex] [pdf]
  • On the terminology for describing the length-force relationship and its changes in airway smooth muscle
    Bai, T. R.; Bates, J. H.; Brusasco, V.; Camoretti-Mercado, B.; Chitano, P.; Deng, L. H.; Dowell, M.; Fabry, B.; Ford, L. E.; Fredberg, J. J.; Gerthoffer, W. T.; Gilbert, S. H.; Gunst, S. J.; Hai, C. M.; Halayko, A. J.; Hirst, S. J.; James, A. L.; Janssen, L. J.; Jones, K. A.; King, G. G.; Lakser, O. J.; Lambert, R. K.; Lauzon, A. M.; Lutchen, K. R.; Maksym, G. N.; Meiss, R. A.; Mijailovich, S. M.; Mitchell, H. W.; Mitchell, R. W.; Mitzner, W.; Murphy, T. M.; Pare, P. D.; Schellenberg, R. R.; Seow, C. Y.; Sieck, G. C.; Smith, P. G.; Smolensky, A. V.; Solway, J.; Stephens, N. L.; Stewart, A. G.; Tang, D. D.; Wang, L.
    In J Appl Physiol, volume 97, number 6, pp. 2029–34, 2004. [bibtex] [pdf]
  • Localized mechanical stress induces time-dependent actin cytoskeletal remodeling and stiffening in cultured airway smooth muscle cells
    Deng, L.; Fairbank, N. J.; Fabry, B.; Smith, P. G.; Maksym, G. N.
    In Am J Physiol Cell Physiol, volume 287, number 2, pp. C440–8, 2004. [bibtex] [pdf]
  • Linearity and time-scale invariance of the creep function in living cells.
    Lenormand, G.; Millet, E.; Fabry, B.; Butler, J. P.; Fredberg, J. J.
    In J Royal Soc Interface, volume 1, number 1, pp. 91–97, 2004. [bibtex] [pdf]
  • Cytoskeletal mechanics in adherent human airway smooth muscle cells: probe specificity and scaling of protein-protein dynamics
    Puig-de-Morales, M.; Millet, E.; Fabry, B.; Navajas, D.; Wang, N.; Butler, J. P.; Fredberg, J. J.
    In Am J Physiol Cell Physiol, volume 287, number 3, pp. C643–54, 2004. [bibtex] [pdf]
  • Rheology of airway smooth muscle cells is associated with cytoskeletal contractile stress
    Stamenovic, D.; Suki, B.; Fabry, B.; Wang, N.; Fredberg, J. J.
    In J Appl Physiol, volume 96, number 5, pp. 1600–5, 2004. [bibtex] [pdf]
2003

2003

  • Microrheology of human lung epithelial cells measured by atomic force microscopy
    Alcaraz, J.; Buscemi, L.; Grabulosa, M.; Trepat, X.; Fabry, B.; Farre, R.; Navajas, D.
    In Biophys J, volume 84, number 3, pp. 2071–9., 2003. [bibtex] [pdf]
  • Fractional derivatives embody essential features of cell rheological behavior
    Djordjevic, V. D.; Jaric, J.; Fabry, B.; Fredberg, J. J.; Stamenovic, D.
    In Ann Biomed Eng, volume 31, number 6, pp. 692–9, 2003. [bibtex] [pdf]
  • Remodeling of the airway smooth muscle cell: are we built of glass?
    Fabry, B.; Fredberg, J. J.
    In Respir Physiol Neurobiol, volume 137, number 2-3, pp. 109–24, 2003. [bibtex] [pdf]
  • Time scale and other invariants of integrative mechanical behavior in living cells
    Fabry, B.; Maksym, G. N.; Butler, J. P.; Glogauer, M.; Navajas, D.; Taback, A. N.; Millet, E. J.; Fredberg, J. J.
    In Phys. Rev. E, volume 68, pp. 041914, 2003. [bibtex] [pdf]
  • Intracellular stress tomography reveals stress focusing and structural anisotropy in cytoskeleton of living cells
    Hu, S.; Chen, J.; Fabry, B.; Numaguchi, Y.; Gouldstone, A.; Ingber, D. E.; Fredberg, J. J.; Butler, J. P.; Wang, N.
    In Am J Physiol Cell Physiol, volume 285, number 5, pp. C1082–90, 2003. [bibtex] [pdf]
  • Oscillatory magnetic tweezers based on ferromagnetic beads and simple coaxial coils
    Trepat, X.; Grabulosa, M.; Buscemi, L.; Rico, F.; Fabry, B.; Fredberg, J.J.; Farré, R.
    In Rev Sci Instrum, volume 74, pp. 4012–4020, 2003. [bibtex] [pdf]
2002

2002

  • Traction fields, moments, and strain energy that cells exert on their surroundings
    Butler, J. P.; Tolic-Norrelykke, I. M.; Fabry, B.; Fredberg, J. J.
    In Am J Physiol Cell Physiol, volume 282, number 3, pp. C595–605., 2002. [bibtex] [pdf]
  • Dynamic equilibration of airway smooth muscle contraction during physiological loading
    Latourelle, J.; Fabry, B.; Fredberg, J. J.
    In J Appl Physiol, volume 92, number 2, pp. 771–9, 2002. [bibtex] [pdf]
  • A finite element model of cell deformation during magnetic bead twisting
    Mijailovich, S. M.; Kojic, M.; Zivkovic, M.; Fabry, B.; Fredberg, J. J.
    In J Appl Physiol, volume 93, number 4, pp. 1429–36., 2002. [bibtex] [pdf]
2001

2001

  • Twisting integrin receptors increases endothelin-1 gene expression in endothelial cells
    Chen, J.; Fabry, B.; Schiffrin, E. L.; Wang, N.
    In Am J Physiol Cell Physiol, volume 280, number 6, pp. C1475–84., 2001. [bibtex] [pdf]
  • Scaling the microrheology of living cells
    Fabry, B.; Maksym, G. N.; Butler, J. P.; Glogauer, M.; Navajas, D.; Fredberg, J. J.
    In Phys Rev Lett, volume 87, number 14, pp. 148102., 2001. [bibtex] [pdf]
  • Time course and heterogeneity of contractile responses in cultured human airway smooth muscle cells
    Fabry, B.; Maksym, G. N.; Shore, S. A.; Moore, P. E.; Panettieri, R. A., Jr.; Butler, J. P.; Fredberg, J. J.
    In J Appl Physiol, volume 91, number 2, pp. 986–94., 2001. [bibtex] [pdf]
2000

2000

  • Analysis of cell mechanics in single vinculin-deficient cells using a magnetic tweezer
    Alenghat, F. J.; Fabry, B.; Tsai, K. Y.; Goldmann, W. H.; Ingber, D. E.
    In Biochem Biophys Res Commun, volume 277, number 1, pp. 93–9., 2000. [bibtex] [pdf]
  • Mechanical properties of cultured human airway smooth muscle cells from 0.05 to 0.4 Hz
    Maksym, G. N.; Fabry, B.; Butler, J. P.; Navajas, D.; Tschumperlin, D. J.; Laporte, J. D.; Fredberg, J. J.
    In J Appl Physiol, volume 89, number 4, pp. 1619–32., 2000. [bibtex] [pdf]
  • Mechanical control of cyclic AMP signalling and gene transcription through integrins
    Meyer, C. J.; Alenghat, F. J.; Rim, P.; Fong, J. H.; Fabry, B.; Ingber, D. E.
    In Nat Cell Biol, volume 2, number 9, pp. 666–8., 2000. [bibtex] [pdf]
1999

1999

  • Dynamic delay time compensation for sampling capillaries used in respiratory mass spectrometry
    Eberhard, L.; Haberthur, C.; Fabry, B.; Guttmann, J.
    In Technol Health Care, volume 7, number 4, pp. 243–59, 1999. [bibtex] [pdf]
  • Implications of heterogeneous bead behavior on cell mechanical properties measured with magnetic twisting cytometry
    Fabry, B.; Maksym, G.N.; Hubmayr, R.D.; Butler, J.P.; Fredberg, J.J.
    In J Magnetism Magnetic Materials, volume 194, number 1-3, pp. 120–125, 1999. [bibtex] [pdf]
  • Additional inspiratory work of breathing imposed by tracheostomy tubes and non-ideal ventilator properties in critically ill patients
    Haberthür, C.; Fabry, B.; Stocker, R.; Ritz, R.; Guttmann, J.
    In Intensive Care Med, volume 25, number 5, pp. 514–9, 1999. [bibtex] [pdf]
  • Role of ERK MAP kinases in responses of cultured human airway smooth muscle cells to IL-1beta
    Laporte, J. D.; Moore, P. E.; Abraham, J. H.; Maksym, G. N.; Fabry, B.; Panettieri, R. A., Jr.; Shore, S. A.
    In Am J Physiol, volume 277, number 5 Pt 1, pp. L943–51., 1999. [bibtex] [pdf]
1998

1998

  • Effects of mechanical unloading/loading on respiratory loop gain and periodic breathing in man
    Haberthür, C.; Fabry, B.; Zappe, D.; Guttmann, J.
    In Respir Physiol, volume 112, number 1, pp. 23–36, 1998. [bibtex] [pdf]
1997

1997

  • Breathing pattern and additional work of breathing in spontaneously breathing patients with different ventilatory demands during inspiratory pressure support and automatic tube compensation
    Fabry, B.; Haberthur, C.; Zappe, D.; Guttmann, J.; Kuhlen, R.; Stocker, R.
    In Intensive Care Med, volume 23, number 5, pp. 545–52, 1997. [bibtex] [pdf]
  • Respiratory comfort of automatic tube compensation and inspiratory pressure support in conscious humans
    Guttmann, J.; Bernhard, H.; Mols, G.; Benzing, A.; Hofmann, P.; Haberthur, C.; Zappe, D.; Fabry, B.; Geiger, K.
    In Intensive Care Med, volume 23, number 11, pp. 1119–24, 1997. [bibtex] [pdf]
  • Delayed derecruitment after removal of PEEP in patients with acute lung injury
    Lichtwarck-Aschoff, M.; Guttmann, J.; Eberhard, L.; Fabry, B.; Birle, J.; Adolph, M.
    In Acta Anaesthesiol Scand, volume 41, number 6, pp. 675–84, 1997. [bibtex] [pdf]
  • Support of spontaneous breathing in the intubated patient: automatic tube compensation (ATC) and proportional assist ventilation (PAV)
    Stocker, R.; Fabry, B.; Eberhard, L.; Haberthur, C.
    In Acta Anaesthesiol Scand Suppl, volume 111, pp. 123–8, 1997. [bibtex] [url]
1996

1996

  • [Added work of breathing, respiratory pattern and determination of ventilator weaning readiness in inspiratory pressure support and and automatic tube compensation]
    Stocker, R.; Fabry, B.; Stein, S.; Zappe, D.; Trentz, O.; Haberthur, C.
    In Unfallchirurg, volume 99, number 10, pp. 764–70, 1996. [bibtex] [pdf]
1995

1995

  • An analysis of desynchronization between the spontaneously breathing patient and ventilator during inspiratory pressure support
    Fabry, B.; Guttmann, J.; Eberhard, L.; Bauer, T.; Haberthur, C.; Wolff, G.
    In Chest, volume 107, number 5, pp. 1387–94, 1995. [bibtex] [pdf]
  • Time constant/volume relationship of passive expiration in mechanically ventilated ARDS patients
    Guttmann, J.; Eberhard, L.; Fabry, B.; Bertschmann, W.; Zeravik, J.; Adolph, M.; Eckart, J.; Wolff, G.
    In Eur Respir J, volume 8, number 1, pp. 114–20, 1995. [bibtex] [pdf]
1994

1994

  • Automatic compensation of endotracheal tube resistance in spontaneously breathing patients
    Fabry, B.; Guttmann, J.; Eberhard, L.; Wolff, G.
    In Technol Health Care, volume 1, number 4, pp. 281–91, 1994. [bibtex] [pdf] [doi]
  • Treatment of patient-ventilator desynchronization with automatic tube compensation (ATC) and propoertional assist ventilation
    Fabry, B.; Guttmann, J.; Eberhard, L.; Wolff, G.
    In Int Care Med, volume 20, number Suppl. 2, pp. 38, 1994. [bibtex] [pdf]
1993

1993

  • Continuous calculation of intratracheal pressure in tracheally intubated patients
    Guttmann, J.; Eberhard, L.; Fabry, B.; Bertschmann, W.; Wolff, G.
    In Anesthesiology, volume 79, number 3, pp. 503–13, 1993. [bibtex] [pdf]


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