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Team

Ben Fabry

 

Prof. Dr. Ben Fabry

  • Job title: Head
  • Working group: Biophysics Group
  • Address:
    Room 02.072
  • Phone number: +49 9131 85-25610
  • Email: ben.fabry@fau.de

Our laboratory studies the mechanical behavior of cells, including cell adhesion, spreading, deformation, motion, migration, invasion, stiffness, viscosity, force generation and mechano-transduction. These mechanical processes are essential for many cellular functions. Abnormal cell mechanical behavior is often associated with severe disorders such as cancer or cardiovascular diseases. We collaborate with research groups worldwide to develop novel technologies that enable us to measure or apply small forces (in the pico-Newton range) and deformations (in the low nano-meter range) that are relevant for cell mechanical functions. We use these technologies to study the behavior of cells on nano-structured biomaterials, cancer cell migration in 3-dimensional biopolymer networks, or the biochemistry of adhesion proteins.

Ben Fabry studied Electrical Engineering at the Technical University of Dresden, Germany. In 1991 he joined the R&D group of the Anesthesiology and Intensive Care Medicine division at Draegerwerk AG, Luebeck, Germany, and subsequently the Department of Clinical Physiology at the University of Basel, Switzerland. After receiving his doctorate degree in Electrical Engineering in 1995, he was a research assistant, and after 1999 a research associate at the Physiology Program, Harvard School of Public Health, Boston, MA, where he worked on smooth muscle physiology and cellular biomechanics. Since 2003, Ben Fabry has been Professor for Medical Physics and Technology at the University of Erlangen-Nuremberg, Germany, and since 2005 he has been the administrative head of the Center for Medical Physics and Technology at the University.

2023
[176] Alexander B. Tesler, Stefan Kolle, Lucia H. Prado, Ingo Thievessen, David Böhringer, Matilda Backholm, Bhuvaneshwari Karunakaran, Heikki A. Nurmi, Mika Latikka, Lena Fischer, Shane Stafslien, Zoran M. Cenev, Jaakko V. I. Timonen, Mark Bruns, Anca Mazare, Ulrich Lohbauer, Sannakaisa Virtanen, Ben Fabry, Patrik Schmuki, Robin H. A. Ras, Joanna Aizenberg, Wolfgang H. Goldmann
Long-term stability of aerophilic metallic surfaces underwater
In Nature Materials, volume 22, 2023. [bibtex] [pdf] [doi]
[175] Lucia H. Prado, David Böhringer, Anca Mazare, Lamborghini Sotelo, George Sarau, Silke Christiansen, Ben Fabry, Patrik Schmuki, Sannakaisa Virtanen, Wolfgang H. Goldmann, Alexander B. Tesler
Silicone-Based Lubricant-Infused Slippery Coating Covalently Bound to Aluminum Substrates for Underwater Applications
In ACS Applied Materials & Interfaces, volume 15, 2023. [bibtex] [pdf] [doi]
[174] A. B. Tesler, S. Kolle, L. H. Prado, I. Thievessen, D. Bohringer, M. Backholm, B. Karunakaran, H. A. Nurmi, M. Latikka, L. Fischer, S. Stafslien, Z. M. Cenev, J. V. I. Timonen, M. Bruns, A. Mazare, U. Lohbauer, S. Virtanen, B. Fabry, P. Schmuki, R. H. A. Ras, J. Aizenberg, W. H. Goldmann
Long-term stability of aerophilic metallic surfaces underwater
In Nat Mater, 2023. (Type: Journal Article) [bibtex] [pdf] [doi]
[173] Kazunori Sunadome, Alek G. Erickson, Delf Kah, Ben Fabry, Csaba Adori, Polina Kameneva, Louis Faure, Shigeaki Kanatani, Marketa Kaucka, Ivar Dehnisch Ellström, Marketa Tesarova, Tomas Zikmund, Jozef Kaiser, Steven Edwards, Koichiro Maki, Taiji Adachi, Takuya Yamamoto, Kaj Fried, Igor Adameyko
Directionality of developing skeletal muscles is set by mechanical forces
In Nature Communications, volume 14, 2023. (Type: Journal Article) [bibtex] [pdf] [doi]
[172] Lucia H. Prado, David Böhringer, Anca Mazare, Lamborghini Sotelo, George Sarau, Silke Christiansen, Ben Fabry, Patrik Schmuki, Sannakaisa Virtanen, Wolfgang H. Goldmann, Alexander B. Tesler
Silicone-Based Lubricant-Infused Slippery Coating Covalently Bound to Aluminum Substrates for Underwater Applications
In ACS Applied Materials & Interfaces, 2023. (Type: Journal Article) [bibtex] [pdf] [doi]
[171] Janet Mansour, Carolin Berwanger, Marcel Jung, Ludwig Eichinger, Ben Fabry, Christoph S. Clemen
Simulated microgravity during clino-rotation is disturbed by spurious fluid motion
In bioRxiv, 2023. (Type: Journal Article) [bibtex] [pdf] [doi]
[170] Tina Czerwinski, Lars Bischof, David Böhringer, Sibel Kara, Ernst Wittmann, Alexander Winterl, Richard Gerum, Gina Nusser, Manuel Wiesinger, Silvia Budday, Anja Lux, Caroline Voskens, Ben Fabry, Christoph Mark
Immune cells employ traction forces to overcome steric hindrance in 3D biopolymer networks
In bioRxiv, 2023. (Type: Journal Article) [bibtex] [pdf] [doi]
[169] D. Bohringer, A. Bauer, I. Moravec, L. Bischof, D. Kah, C. Mark, T. J. Grundy, E. Gorlach, G. M. O'Neill, S. Budday, P. L. Strissel, R. Strick, A. Malandrino, R. Gerum, M. Mak, M. Rausch, B. Fabry
Fiber alignment in 3D collagen networks as a biophysical marker for cell contractility
In Matrix Biol, volume 124, 2023. (Type: Journal Article) [bibtex] [pdf] [doi]
2022
[168] Ingo Thievessen, Frank Suhr, Silvia Vergarajauregui, Ralph T. Böttcher, Klara Brixius, Georg Rosenberger, Oliver Dewald, Bernd K. Fleischmann, Alexander Ghanem, Marcus Krüger, Felix B. Engel, Ben Fabry, Wilhelm Bloch, Reinhard Fässler
The focal adhesion protein β-parvin controls cardiomyocyte shape and sarcomere assembly in response to mechanical load
In Current Biology, 2022. (Type: Journal Article) [bibtex] [pdf] [doi]
[167] Marina Spörrer, Delf Kah, Richard C. Gerum, Barbara Reischl, Danyil Huraskin, Claire A. Dessalles, Werner Schneider, Wolfgang H. Goldmann, Harald Herrmann, Ingo Thievessen, Christoph S. Clemen, Oliver Friedrich, Said Hashemolhosseini, Rolf Schröder, Ben Fabry
The desmin mutation R349P increases contractility and fragility of stem cell-generated muscle micro-tissues
In Neuropathology and Applied Neurobiology, volume 48, 2022. (Type: Journal Article) [bibtex] [pdf] [doi]
[166] Lovis Schween, Norbert Mücke, Stéphanie Portet, Wolfgang H. Goldmann, Harald Herrmann, Ben Fabry
Dual-wavelength stopped-flow analysis of the lateral and longitudinal assembly kinetics of vimentin
In Biophysical Journal, volume 121, 2022. (Type: Journal Article) [bibtex] [pdf] [doi]
[165] M. Prechova, Z. Adamova, A. L. Schweizer, M. Maninova, A. Bauer, D. Kah, S. M. Meier-Menches, G. Wiche, B. Fabry, M. Gregor
Plectin-mediated cytoskeletal crosstalk controls cell tension and cohesion in epithelial sheets
In J Cell Biol, volume 221, 2022. (Type: Journal Article) [bibtex] [pdf] [doi]
[164] Luz del Carmen Martínez-Sánchez, Phuong Anh Ngo, Rashmita Pradhan, Lukas-Sebastian Becker, David Boehringer, Despina Soteriou, Marketa Kubankova, Christine Schweitzer, Tatyana Koch, Veronika Thonn, Lena Erkert, Iris Stolzer, Claudia Günther, Christoph Becker, Benno Weigmann, Monika Klewer, Christoph Daniel, Kerstin Amann, Stefan Tenzer, Raja Atreya, Martin Bergo, Cord Brakebusch, Alastair J M Watson, Jochen Guck, Ben Fabry, Imke Atreya, Markus F Neurath, Rocío López-Posadas
Epithelial RAC1-dependent cytoskeleton dynamics controls cell mechanics, cell shedding and barrier integrity in intestinal inflammation
In Gut, 2022. (Type: Journal Article) [bibtex] [pdf]
[163] A. Houstin, D. P. Zitterbart, K. Heerah, O. Eisen, V. Planas-Bielsa, B. Fabry, C. Le Bohec
Juvenile emperor penguin range calls for extended conservation measures in the Southern Ocean
In R Soc Open Sci, volume 9, 2022. (Type: Journal Article) [bibtex] [pdf] [doi]
[162] A. Houstin, D. P. Zitterbart, A. Winterl, S. Richter, V. Planas-Bielsa, D. Chevallier, A. Ancel, J. Fournier, B. Fabry, C. Le Bohec
Biologging of emperor penguins-Attachment techniques and associated deployment performance
In PLoS One, volume 17, 2022. (Type: Journal Article) [bibtex] [pdf] [doi]
[161] Richard Gerum, Elham Mirzahossein, Mar Eroles, Jennifer Elsterer, Astrid Mainka, Andreas Bauer, Selina Sonntag, Alexander Winterl, Johannes Bartl, Lena Fischer, Shada Abuhattum, Ruchi Goswami, Salvatore Girardo, Jochen Guck, Stefan Schrüfer, Nadine Ströhlein, Mojtaba Nosratlo, Harald Herrmann, Dorothea Schultheis, Felix Rico, Sebastian Johannes Müller, Stephan Gekle, Ben Fabry
Viscoelastic properties of suspended cells measured with shear flow deformation cytometry
In eLife, volume 11, 2022. (Type: Journal Article) [bibtex] [pdf] [doi]
[160] Lena Fischer, Mojtaba Nosratlo, Katharina Hast, Emine Karakaya, Nadine Ströhlein, Tilman U. Esser, Richard Gerum, Sebastian Richter, Felix Engel, Rainer Detsch, Ben Fabry, Ingo Thievessen
Calcium supplementation of bioinks reduces shear stress-induced cell damage during bioprinting
In Biofabrication, volume 14, 2022. (Type: Journal Article) [bibtex] [pdf] [doi]
[159] David Böhringer, Mar Cóndor, Lars Bischof, Tina Czerwinski, Andreas Bauer, Caroline Voskens, Silvia Budday, Christoph Mark, Ben Fabry, Richard Gerum
Dynamic traction force measurements of migrating immune cells in 3D matrices
In bioRxiv, 2022. (Type: Journal Article) [bibtex] [pdf] [doi]
2021
[158] C. Metzner, F. Hörsch, C. Mark, T. Czerwinski, A. Winterl, C. Voskens, B. Fabry
Detecting long-range interactions between migrating cells
In Scientific Reports, volume 11, 2021. (Type: Journal Article) [bibtex] [pdf] [doi]
[157] Alzbeta Krausova, Petra Buresova, Lenka Sarnova, Gizem Oyman-Eyrilmez, Jozef Skarda, Pavel Wohl, Lukas Bajer, Eva Sticova, Lenka Bartonova, Jiri Pacha, Gizela Koubkova, Jan Prochazka, Marina Spörrer, Christopher Dürrbeck, Zuzana Stehlikova, Martin Vit, Natalia Ziolkowska, Radislav Sedlacek, Daniel Jirak, Miloslav Kverka, Gerhard Wiche, Ben Fabry, Vladimir Korinek, Martin Gregor
Plectin ensures intestinal epithelial integrity and protects colon against colitis
In Mucosal Immunology, volume 14, 2021. (Type: Journal Article) [bibtex] [pdf] [doi]
[156] Delf Kah, Alexander Winterl, Magdalena Přechová, Ulrike Schöler, Werner Schneider, Oliver Friedrich, Martin Gregor, Ben Fabry
A low-cost uniaxial cell stretcher for six parallel wells
In HardwareX, volume 9, 2021. (Type: Journal Article) [bibtex] [pdf] [doi]
[155] Delf Kah, Ben Fabry, Richard C. Gerum
An Interactive Framework for Teaching Viscoelastic Modeling
In The Biophysicist, volume 2, 2021. (Type: Journal Article) [bibtex] [pdf] [doi]
[154] H. Horder, M. Guaza Lasheras, N. Grummel, A. Nadernezhad, J. Herbig, S. Ergun, J. Tessmar, J. Groll, B. Fabry, P. Bauer-Kreisel, T. Blunk
Bioprinting and Differentiation of Adipose-Derived Stromal Cell Spheroids for a 3D Breast Cancer-Adipose Tissue Model
In Cells, volume 10, 2021. (Type: Journal Article) [bibtex] [pdf] [doi]
[153] Jonas Hazur, Nadine Endrizzi, Dirk W. Schubert, Aldo R. Boccaccini, Ben Fabry
Stress relaxation amplitude of hydrogels determines migration, proliferation, and morphology of cells in 3-D culture
In Biomaterials Science, 2021. (Type: Journal Article) [bibtex] [pdf] [doi]
[152] Andreas Bauer, Magdalena Prechová, Lena Fischer, Ingo Thievessen, Martin Gregor, Ben Fabry
pyTFM: A tool for traction force and monolayer stress microscopy
In PLOS Computational Biology, volume 17, 2021. (Type: Journal Article) [bibtex] [pdf] [doi]
2020
[151] Alexander Winterl, Sebastian Richter, Aymeric Houstin, Anna P. Nesterova, Francesco Bonadonna, Werner Schneider, Ben Fabry, Céline Le Bohec, Daniel P. Zitterbart
micrObs – A customizable time-lapse camera for ecological studies
In HardwareX, volume 8, 2020. (Type: Journal Article) [bibtex] [pdf] [doi]
[150] Ronny Reimann, Delf Kah, Christoph Mark, Jan Dettmer, Theresa M. Reimann, Richard C. Gerum, Anja Geitmann, Ben Fabry, Petra Dietrich, Benedikt Kost
Durotropic Growth of Pollen Tubes
In Plant Physiology, volume 183, 2020. (Type: Journal Article) [bibtex] [pdf] [doi]
[149] M. Rausch, D. Bohringer, M. Steinmann, D. W. Schubert, S. Schrufer, C. Mark, B. Fabry
Measurement of Skeletal Muscle Fiber Contractility with High-Speed Traction Microscopy
In Biophys J, volume 118, 2020. (Type: Journal Article) [bibtex] [pdf] [doi]
[148] S. J. Muller, E. Mirzahossein, E. N. Iftekhar, C. Bacher, S. Schrufer, D. W. Schubert, B. Fabry, S. Gekle
Flow and hydrodynamic shear stress inside a printing needle during biofabrication
In PLoS One, volume 15, 2020. (Type: Journal Article) [bibtex] [pdf] [doi]
[147] Christoph Mark, Tina Czerwinski, Susanne Roessner, Astrid Mainka, Franziska Hörsch, Lucas Heublein, Alexander Winterl, Sebastian Sanokowski, Sebastian Richter, Nina Bauer, Thomas E. Angelini, Gerold Schuler, Ben Fabry, Caroline J. Voskens
Cryopreservation impairs 3-D migration and cytotoxicity of natural killer cells
In Nature Communications, volume 11, 2020. (Type: Journal Article) [bibtex] [pdf] [doi]
[146] Christoph Mark, Thomas J. Grundy, Pamela L. Strissel, David Böhringer, Nadine Grummel, Richard Gerum, Julian Steinwachs, Carolin C. Hack, Matthias W. Beckmann, Markus Eckstein, Reiner Strick, Geraldine M. O'Neill, Ben Fabry
Collective forces of tumor spheroids in three-dimensional biopolymer networks
In eLife, volume 9, 2020. (Type: Journal Article) [bibtex] [pdf] [doi]
[145] Delf Kah, Christopher Dürrbeck, Werner Schneider, Ben Fabry, Richard Carl Gerum
High-Force Magnetic Tweezers with Hysteresis-Free Force Feedback
In Biophysical Journal, volume 119, 2020. (Type: Journal Article) [bibtex] [pdf] [doi]
2019
[144] Marina Sporrer, Ania Prochnicki, Regine C. Tölle, Alexander Nyström, Philipp R. Esser, Melanie Homberg, Ioannis Athanasiou, Eleni Zingkou, Achim Schilling, Richard Gerum, Ingo Thievessen, Lilli Winter, Leena Bruckner-Tuderman, Ben Fabry, Thomas M. Magin, Jörn Dengjel, Rolf Schröder, Dimitra Kiritsi
Treatment of keratinocytes with 4-phenylbutyrate in epidermolysis bullosa: Lessons for therapies in keratin disorders
In EBioMedicine, volume 44, 2019. (Type: Journal Article) [bibtex] [pdf] [doi]
[143] S. Patz, D. Fovargue, K. Schregel, N. Nazari, M. Palotai, P. E. Barbone, B. Fabry, A. Hammers, S. Holm, S. Kozerke, D. Nordsletten, R. Sinkus
Imaging localized neuronal activity at fast time scales through biomechanics
In Science Advances, volume 5, 2019. (Type: Journal Article) [bibtex] [pdf] [doi]
[142] M. H. Kafshgari, A. Mazare, M. Distaso, W. H. Goldmann, W. Peukert, B. Fabry, P. Schmuki
Intracellular Drug Delivery with Anodic Titanium Dioxide Nanotubes and Nanocylinders
In ACS Appl Mater Interfaces, volume 11, 2019. (Type: Journal Article) [bibtex] [doi]
[141] M. Hasanzadeh Kafshgari, D. Kah, A. Mazare, N. T. Nguyen, M. Distaso, W. Peukert, W. H. Goldmann, P. Schmuki, B. Fabry
Anodic Titanium Dioxide Nanotubes for Magnetically Guided Therapeutic Delivery
In Sci Rep, volume 9, 2019. (Type: Journal Article) [bibtex] [pdf] [doi]
[140] Richard C. Gerum, Sebastian Richter, Alexander Winterl, Christoph Mark, Ben Fabry, Céline Le Bohec, Daniel P. Zitterbart
CameraTransform: A Python package for perspective corrections and image mapping
In SoftwareX, volume 10, 2019. (Type: Journal Article) [bibtex] [pdf] [doi]
[139] M. Cóndor, C. Mark, R. C. Gerum, N. C. Grummel, A. Bauer, J. M. García-Aznar, B. Fabry
Breast cancer cells adapt contractile forces to overcome steric hindrance
In Biophysical Journal, volume 116, 2019. (Type: Journal Article) [bibtex] [pdf] [doi]
2018
[138] C. Scholtysek, N. Ipseiz, C. Bohm, B. Krishnacoumar, M. Stenzel, T. Czerwinski, K. Palumbo-Zerr, T. Rothe, D. Weidner, A. Klej, C. Stoll, J. Distler, J. Tuckermann, M. Herrmann, B. Fabry, W. H. Goldmann, G. Schett, G. Kronke
NR4A1 Regulates Motility of Osteoclast Precursors and Serves as Target for the Modulation of Systemic Bone Turnover
In J Bone Miner Res, volume 33, 2018. (Type: Journal Article) [bibtex] [pdf] [doi]
[137] S. Richter, R. C. Gerum, W. Schneider, B. Fabry, C. Le Bohec, D. P. Zitterbart
A remote‐controlled observatory for behavioural and ecological research: A case study on emperor penguins
In Methods in Ecology and Evolution, volume 0, 2018. (Type: Journal Article) [bibtex] [pdf] [doi]
[136] S. Richter, R. Gerum, A. Winterl, A. Houstin, M. Seifert, J. Peschel, B. Fabry, C. Le Bohec, D. P. Zitterbart
Phase transitions in huddling emperor penguins
In Journal of Physics D-Applied Physics, volume 51, 2018. (Type: Journal Article) [bibtex] [pdf] [doi]
[135] C. Metzner, J. Lange, P. Krauss, N. Wunderling, J. Ubelacker, F. Martin, B. Fabry
Pressure-driven collective growth mechanism of planar cell colonies
In Journal of Physics D-Applied Physics, volume 51, 2018. (Type: Journal Article) [bibtex] [pdf] [doi]
[134] C. Mark, C. Metzner, L. Lautscham, P. L. Strissel, R. Strick, B. Fabry
Bayesian model selection for complex dynamic systems
In Nat Commun, volume 9, 2018. (Type: Journal Article) [bibtex] [pdf] [doi]
[133] R.C. Gerum, S. Richter, B. Fabry, C. Le Bohec, F. Bonadonna, A. Nesterova, D. P. Zitterbart
Structural organisation and dynamics in king penguin colonies
In Journal of Physics D: Applied Physics, volume 51, 2018. (Type: Journal Article) [bibtex] [pdf] [doi]
2017
[132] J. R. Lange, C. Metzner, S. Richter, W. Schneider, M. Spermann, T. Kolb, G. Whyte, B. Fabry
Unbiased High-Precision Cell Mechanical Measurements with Microconstrictions
In Biophys J, volume 112, 2017. (Type: Journal Article) [bibtex] [pdf] [doi]
[131] P. Krauss, C. Metzner, A. Schilling, C. Schutz, K. Tziridis, B. Fabry, H. Schulze
Adaptive stochastic resonance for unknown and variable input signals
In Sci Rep, volume 7, 2017. (Type: Journal Article) [bibtex] [pdf] [doi]
[130] S. Diermeier, J. Iberl, K. Vetter, M. Haug, C. Pollmann, B. Reischl, A. Buttgereit, S. Schurmann, M. Sporrer, W. H. Goldmann, B. Fabry, F. Elhamine, R. Stehle, G. Pfitzer, L. Winter, C. S. Clemen, H. Herrmann, R. Schroder, O. Friedrich
Early signs of architectural and biomechanical failure in isolated myofibers and immortalized myoblasts from desmin-mutant knock-in mice
In Sci Rep, volume 7, 2017. (Type: Journal Article) [bibtex] [pdf] [doi]
[129] M. Condor, J. Steinwachs, C. Mark, J. M. Garcia-Aznar, B. Fabry
Traction Force Microscopy in 3-Dimensional Extracellular Matrix Networks
In Curr Protoc Cell Biol, volume 75, 2017. (Type: Journal Article) [bibtex] [pdf] [doi]
[128] J. Branis, C. Pataki, M. Sporrer, R. C. Gerum, A. Mainka, V. Cermak, W. H. Goldmann, B. Fabry, J. Brabek, D. Rosel
The role of focal adhesion anchoring domains of CAS in mechanotransduction
In Sci Rep, volume 7, 2017. (Type: Journal Article) [bibtex] [pdf] [doi]
[127] P. M. Bradbury, K. Turner, C. Mitchell, K. R. Griffin, S. Middlemiss, L. Lau, R. Dagg, E. Taran, J. Cooper-White, B. Fabry, G. M. O'Neill
The focal adhesion targeting domain of p130Cas confers a mechanosensing function
In J Cell Sci, volume 130, 2017. (Type: Journal Article) [bibtex] [pdf] [doi]
2016
[126] V. Wagener, A. Schilling, A. Mainka, D. Hennig, R. Gerum, M. L. Kelch, S. Keim, B. Fabry, S. Virtanen
Cell Adhesion on Surface-Functionalized Magnesium
In ACS Appl Mater Interfaces, volume 8, 2016. (Type: Journal Article) [bibtex] [pdf] [doi]
[125] J. Steinwachs, C. Metzner, K. Skodzek, N. Lang, I. Thievessen, C. Mark, S. Munster, K. E. Aifantis, B. Fabry
Three-dimensional force microscopy of cells in biopolymer networks
In Nat Methods, volume 13, 2016. (Type: Journal Article) [bibtex] [pdf] [doi]
[124] S. Schurmann, S. Wagner, S. Herlitze, C. Fischer, S. Gumbrecht, A. Wirth-Hucking, G. Prolss, L. A. Lautscham, B. Fabry, W. H. Goldmann, V. Nikolova-Krstevski, B. Martinac, O. Friedrich
The IsoStretcher: An isotropic cell stretch device to study mechanical biosensor pathways in living cells
In Biosens Bioelectron, volume 81, 2016. (Type: Journal Article) [bibtex] [pdf] [doi]
[123] T. J. Grundy, E. De Leon, K. R. Griffin, B. W. Stringer, B. W. Day, B. Fabry, J. Cooper-White, G. M. O'Neill
Differential response of patient-derived primary glioblastoma cells to environmental stiffness
In Sci Rep, volume 6, 2016. (Type: Journal Article) [bibtex] [pdf] [doi]
[122] R. C. Gerum, S. Richter, B. Fabry, D. P. Zitterbart
ClickPoints: an expandable toolbox for scientific image annotation and analysis
In Methods in Ecology and Evolution, 2016. (Type: Journal Article) [bibtex] [pdf] [doi]
[121] Y. Ge, Y. H. Lin, L. A. Lautscham, W. H. Goldmann, B. Fabry, C. A. Naumann
N-cadherin-functionalized polymer-tethered multi-bilayer: a cell surface-mimicking substrate to probe cellular mechanosensitivity
In Soft Matter, volume 12, 2016. (Type: Journal Article) [bibtex] [pdf] [doi]
[120] A. Chronopoulos, B. Robinson, M. Sarper, E. Cortes, V. Auernheimer, D. Lachowski, S. Attwood, R. Garcia, S. Ghassemi, B. Fabry, A. Del Rio Hernandez
ATRA mechanically reprograms pancreatic stellate cells to suppress matrix remodelling and inhibit cancer cell invasion
In Nat Commun, volume 7, 2016. (Type: Journal Article) [bibtex] [pdf] [doi]
[119] N. Bonakdar, R. Gerum, M. Kuhn, M. Sporrer, A. Lippert, W. Schneider, K. E. Aifantis, B. Fabry
Mechanical plasticity of cells
In Nat Mater, volume 15, 2016. (Type: Journal Article) [bibtex] [pdf] [doi]
2015
[118] C. Weis, A. Hess, L. Budinsky, B. Fabry
In-Vivo Imaging of Cell Migration Using Contrast Enhanced MRI and SVM Based Post-Processing
In PLoS One, volume 10, 2015. (Type: Journal Article) [bibtex] [pdf] [doi]
[117] I. Thievessen, N. Fakhri, J. Steinwachs, V. Kraus, R. S. McIsaac, L. Gao, B. C. Chen, M. A. Baird, M. W. Davidson, E. Betzig, R. Oldenbourg, C. M. Waterman, B. Fabry
Vinculin is required for cell polarization, migration, and extracellular matrix remodeling in 3D collagen
In FASEB J, volume 29, 2015. (Type: Journal Article) [bibtex] [pdf] [doi]
[116] B. Sarker, J. Rompf, R. Silva, N. Lang, R. Detsch, J. Kaschta, B. Fabry, A. R. Boccaccini
Alginate-based hydrogels with improved adhesive properties for cell encapsulation
In Int J Biol Macromol, volume 78, 2015. (Type: Journal Article) [bibtex] [pdf] [doi]
[115] E. K. Paluch, C. M. Nelson, N. Biais, B. Fabry, J. Moeller, B. L. Pruitt, C. Wollnik, G. Kudryasheva, F. Rehfeldt, W. Federle
Mechanotransduction: use the force(s)
In BMC Biol, volume 13, 2015. (Type: Journal Article) [bibtex] [pdf] [doi]
[114] C. Metzner, C. Mark, J. Steinwachs, L. Lautscham, F. Stadler, B. Fabry
Superstatistical analysis and modelling of heterogeneous random walks
In Nat Comm, volume 6, 2015. (Type: Journal Article) [bibtex] [pdf] [doi]
[113] A. J. Licup, S. Munster, A. Sharma, M. Sheinman, L. M. Jawerth, B. Fabry, D. A. Weitz, F. C. MacKintosh
Stress controls the mechanics of collagen networks
In Proc Natl Acad Sci U S A, volume 112, 2015. (Type: Journal Article) [bibtex] [pdf] [doi]
[112] L. A. Lautscham, C. Kammerer, J. R. Lange, T. Kolb, C. Mark, A. Schilling, P. L. Strissel, R. Strick, C. Gluth, A. C. Rowat, C. Metzner, B. Fabry
Migration in Confined 3D Environments Is Determined by a Combination of Adhesiveness, Nuclear Volume, Contractility, and Cell Stiffness
In Biophys J, volume 109, 2015. (Type: Journal Article) [bibtex] [pdf] [doi]
[111] J. R. Lange, J. Steinwachs, T. Kolb, L. A. Lautscham, I. Harder, G. Whyte, B. Fabry
Microconstriction Arrays for High-Throughput Quantitative Measurements of Cell Mechanical Properties
In Biophys J, volume 109, 2015. (Type: Journal Article) [bibtex] [pdf] [doi]
[110] N. R. Lang, K. Skodzek, S. Hurst, A. Mainka, J. Steinwachs, J. Schneider, K. E. Aifantis, B. Fabry
Biphasic response of cell invasion to matrix stiffness in three-dimensional biopolymer networks
In Acta Biomater, volume 13, 2015. (Type: Journal Article) [bibtex] [pdf] [doi]
[109] F.M. Hecht, J. Rheinlaender, N. Schierbaum, W. H. Goldmann, B. Fabry, T.E. Schäffer
Imaging viscoelastic properties of living cells by AFM: Power-law rheology on the nanoscale
In Soft Matter, volume 11, 2015. (Type: Journal Article) [bibtex] [pdf]
[108] R. C. Gerum, B. Fabry, C. Metzner
Emergence of Asynchronous Local Clocks in Excitable Media
In PLoS One, volume 10, 2015. (Type: Journal Article) [bibtex] [pdf] [doi]
[107] R. Buslei, P. L. Strissel, C. Henke, R. Schey, N. Lang, M. Ruebner, C. C. Stolt, B. Fabry, M. Buchfelder, R. Strick
Activation and regulation of endogenous retroviral genes in the human pituitary gland and related endocrine tumours
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[106] N. Bonakdar, A. Schilling, M. Sporrer, P. Lennert, A. Mainka, L. Winter, G. Walko, G. Wiche, B. Fabry, W. H. Goldmann
Determining the mechanical properties of plectin in mouse myoblasts and keratinocytes
In Exp Cell Res, 2015. (Type: Journal Article) [bibtex] [pdf] [doi]
[105] V. Auernheimer, L. A. Lautscham, M. Leidenberger, O. Friedrich, B. Kappes, B. Fabry, W. H. Goldmann
Vinculin phosphorylation at residues Y100 and Y1065 is required for cellular force transmission
In J Cell Sci, volume 128, 2015. (Type: Journal Article) [bibtex] [pdf] [doi]
2014
[104] D. Zitterbart, Richter S., Spiekermann G., Behrens LK., Regnery J., Fontes RP., Hänssler T., G. König-Langlo, R. Weller, B. Fabry
Are environmental factors responsible for changed breeding behaviour in emperor penguins?
In Antarctic Science, 2014. (Type: Journal Article) [bibtex] [pdf] [doi]
[103] R. Silva, B. Fabry, A. R. Boccaccini
Fibrous protein-based hydrogels for cell encapsulation
In Biomaterials, volume 35, 2014. (Type: Journal Article) [bibtex] [pdf] [doi]
[102] C. Mark, C. Metzner, B. Fabry
Bayesian inference of time varying parameters in autoregressive processes
In arXiv:1405.1668, 2014. (Type: Journal Article) [bibtex] [pdf]
[101] L. A. Lautscham, C. Y. Lin, V. Auernheimer, C. A. Naumann, W. H. Goldmann, B. Fabry
Biomembrane-mimicking lipid bilayer system as a mechanically tunable cell substrate
In Biomaterials, volume 35, 2014. (Type: Journal Article) [bibtex] [pdf] [doi]
[100] R. Janostiak, J. Brabek, V. Auernheimer, Z. Tatarova, L. A. Lautscham, T. Dey, J. Gemperle, R. Merkel, W. H. Goldmann, B. Fabry, D. Rosel
CAS directly interacts with vinculin to control mechanosensing and focal adhesion dynamics
In Cell Mol Life Sci, volume 71, 2014. (Type: Journal Article) [bibtex] [pdf] [doi]
[99] A. Grigore, B. Sarker, B. Fabry, A. R. Boccaccini, R. Detsch
Behavior of Encapsulated MG-63 Cells in RGD and Gelatine-Modified Alginate Hydrogels
In Tissue Eng Part A, 2014. (Type: Journal Article) [bibtex] [pdf] [doi]
2013
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Labeling of cancer cells with magnetic nanoparticles for magnetic resonance imaging
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[97] S. Munster, L. M. Jawerth, B. Fabry, D. A. Weitz
Structure and mechanics of fibrin clots formed under mechanical perturbation
In J Thromb Haemost, volume 11, 2013. (Type: Journal Article) [bibtex] [pdf] [doi]
[96] S. Munster, L. M. Jawerth, B. A. Leslie, J. I. Weitz, B. Fabry, D. A. Weitz
Strain history dependence of the nonlinear stress response of fibrin and collagen networks
In Proc Natl Acad Sci U S A, volume 110, 2013. (Type: Journal Article) [bibtex] [pdf] [doi]
[95] S. Munster, B. Fabry
A simplified implementation of the bubble analysis of biopolymer network pores
In Biophys J, volume 104, 2013. (Type: Journal Article) [bibtex] [pdf] [doi]
[94] L. Lautscham, C. Yu-Hung Lin, V. Auernheimer, D. Minner, W. H. Goldmann, C. A. Naumann, B. Fabry
Mechanosensing of Cells in Laminin-Fuctionalized Biomembrane-Mimicking Substrates
In Biophysical Journal, volume 104, 2013. (Type: Journal Article) [bibtex] [pdf] [doi]
[93] J. R. Lange, B. Fabry
Cell and tissue mechanics in cell migration
In Exp Cell Res, volume 319, 2013. (Type: Journal Article) [bibtex] [pdf] [doi]
[92] N.R. Lang, S. Muenster, C. Metzner, K. Krauss, S. Schuermann, J. Lange, K.E. Aifantis, O. Friedrich, B. Fabry
Estimating the 3D pore size distribution of biopolymer networks from directionally biased data
In Biophys J, volume 105, 2013. (Type: Journal Article) [bibtex] [pdf]
[91] J. J. Kim, B. Yin, C. S. Christudass, N. Terada, K. Rajagopalan, B. Fabry, D. Y. Lee, T. Shiraishi, R. H. Getzenberg, R. W. Veltri, S. S. An, S. M. Mooney
Acquisition of paclitaxel resistance is associated with a more aggressive and invasive phenotype in prostate cancer
In J Cell Biochem, volume 114, 2013. (Type: Journal Article) [bibtex] [pdf] [doi]
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Identification of DAPK as a scaffold protein for the LIMK/cofilin complex in TNF-induced apoptosis
In Int J Biochem Cell Biol, volume 45, 2013. (Type: Journal Article) [bibtex] [pdf] [doi]
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Vinculin, cell mechanics and tumour cell invasion
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The origin of traveling waves in an emperor penguin huddle
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[87] P. Cai, Y. Mizutani, M. Tsuchiya, J. M. Maloney, B. Fabry, K. J. Van Vliet, T. Okajima
Quantifying cell-to-cell variation in power-law rheology
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2012
[86] J. Zhong, J. B. Baquiran, N. Bonakdar, J. Lees, Y. W. Ching, E. Pugacheva, B. Fabry, G. M. O'Neill
NEDD9 stabilizes focal adhesions, increases binding to the extra-cellular matrix and differentially effects 2D versus 3D cell migration
In PLoS One, volume 7, 2012. (Type: Journal Article) [bibtex] [pdf]
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Akt and p53 are potential mediators of reduced mammary tumor growth by Chloroquine and the mTOR inhibitor RAD001
In Biochem Pharmacol, volume 83, 2012. (Type: Journal Article) [bibtex] [pdf]
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Parameter-Free Binarization and Skeletonization of Fiber Networks from Confocal Image Stacks
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3D Traction Forces in Cancer Cell Invasion
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Inhibition of Rho kinases increases directional motility of microvascular endothelial cells
In Biochem Pharmacol, volume 83, 2012. (Type: Journal Article) [bibtex] [pdf]
[81] P. Bradbury, B. Fabry, G. M. O'Neill
Occupy tissue: the movement in cancer metastasis
In Cell Adh Migr, volume 6, 2012. (Type: Journal Article) [bibtex] [pdf] [doi]
[80] N Bonakdar, Luczak J., L. Lautscham, M. Czonstke, T.M. Koch, A. Mainka, T. Jungbauer, W.H. Goldmann, R. Schröder, B. Fabry
Biomechanical characterization of a desminopathy in primary human myoblasts
In Biochem Biophys Res Commun, volume 419, 2012. (Type: Journal Article) [bibtex] [pdf] [doi]
2011
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Coordinated movements prevent jamming in an Emperor penguin huddle
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Poresizes in random line networks
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Integrin adhesion and force coupling are independently regulated by localized PtdIns(4,5)2 synthesis
In Embo J, volume 30, 2011. (Type: Journal Article) [bibtex] [pdf]
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Nonlinear viscoelasticity of adherent cells is controlled by cytoskeletal tension
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Linear and Nonlinear Rheology of Living Cells
In Annu Rev Mater Res, volume 41, 2011. (Type: Journal Article) [bibtex] [pdf]
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Control of magnesium corrosion and biocompatibility with biomimetic coatings
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Calcium imaging in the optical stretcher
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Focal Adhesion Kinase Stabilizes the Cytoskeleton
In Biophys J, volume 101, 2011. (Type: Journal Article) [bibtex] [pdf]
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Head/tail interaction of vinculin influences cell mechanical behavior
In Biochem Biophys Res Commun, volume 406, 2011. (Type: Journal Article) [bibtex] [pdf]
2010
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Pulling it together in three dimensions
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Size-selective separation of macromolecules by nanochannel titania membrane with self-cleaning (declogging) ability
In J Am Chem Soc, volume 132, 2010. (Type: Journal Article) [bibtex] [pdf]
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Vinculin facilitates cell invasion into three-dimensional collagen matrices
In J Biol Chem, volume 285, 2010. (Type: Journal Article) [bibtex] [pdf]
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Integrin alpha5beta1 facilitates cancer cell invasion through enhanced contractile forces
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Fluctuations of cytoskeleton-bound microbeads - the effect of bead-receptor binding dynamics
In J Phys Condens Matter, volume 22, 2010. (Type: Journal Article) [bibtex] [pdf]
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Anodic mesoporous TiO(2) layer on Ti for enhanced formation of biomimetic hydroxyapatite
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The role of the tissue microenvironment in the regulation of cancer cell motility and invasion
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2009
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Neutrophil morphology and migration are affected by substrate elasticity
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Single-cell response to stiffness exhibits muscle-like behavior
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Noise and critical phenomena in biochemical signaling cycles at small molecule numbers
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Effect of surface pre-treatments on biocompatibility of magnesium
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Active soft glassy rheology of adherent cells
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Filamin A is essential for active cell stiffening but not passive stiffening under external force
In Biophys J, volume 96, 2009. (Type: Journal Article) [bibtex] [pdf]
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A Blind Spot in Confocal Reflection Microscopy: The Dependence of Fiber Brightness on Fiber Orientation in Imaging Biopolymer Networks
In Biophys J, volume 98, 2009. (Type: Journal Article) [bibtex] [pdf]
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Anchorage of vinculin to lipid membranes influences cell mechanical properties
In Biophys J, volume 97, 2009. (Type: Journal Article) [bibtex] [pdf]
2008
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Magnetically Guided Titania Nanotubes for Site-Selective Photocatalysis and Drug Release
In Angewandte Chemie, volume 120, 2008. (Type: Journal Article) [bibtex] [pdf]
[54] S. Runz, C. T. Mierke, S. Joumaa, J. Behrens, B. Fabry, P. Altevogt
CD24 induces localization of beta1 integrin to lipid raft domains
In Biochem Biophys Res Commun, volume 365, 2008. (Type: Journal Article) [bibtex] [pdf]
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Up-regulation of Rho/ROCK Signaling in Sarcoma Cells Drives Invasion and Increased Generation of Protrusive Forces
In Mol Cancer Res, volume 6, 2008. (Type: Journal Article) [bibtex] [pdf]
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Mechano-coupling and regulation of contractility by the vinculin tail domain.
In Biophys J, volume 94, 2008. (Type: Journal Article) [bibtex] [pdf]
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Contractile forces in tumor cell migration
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Breakdown of the endothelial barrier function in tumor cell transmigration
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Robust Pore Size Analysis of Filamentous Networks From 3D Confocal Microscopy
In Biophys J, volume 95, 2008. (Type: Journal Article) [bibtex] [pdf]
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Hydrodynamic thickening of lubricating fluid layer beneath sliding mesothelial tissues
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2007
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Airway smooth muscle dynamics: a common pathway of airway obstruction in asthma
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Stress fluctuations and motion of cytoskeletal-bound markers
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Airway Hyperresponsiveness, Remodeling, and Smooth Muscle Mass: Right Answer, Wrong Reason?
In Am J Respir Cell Mol Biol, volume 37, 2007. (Type: Journal Article) [bibtex] [pdf]
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Simple model of cytoskeletal fluctuations
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High-Force Magnetic Tweezers with Force Feedback for Biological Applications
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Mechanotransduction, asthma, and airway smooth muscle
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Cytoskeleton dynamics: Fluctuations within the network
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The cytoskeleton as a soft glassy material. In: Cytoskeletal Mechanics: Models and Measurements.
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Do biophysical properties of the airway smooth muscle in culture predict airway hyperresponsiveness?
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Rat airway smooth muscle cell during actin modulation: rheology and glassy dynamics
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Cytoskeletal remodelling and slow dynamics in the living cell
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Rheology of airway smooth muscle cells is associated with cytoskeletal contractile stress
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Cytoskeletal mechanics in adherent human airway smooth muscle cells: probe specificity and scaling of protein-protein dynamics
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Linearity and time-scale invariance of the creep function in living cells.
In J Royal Soc Interface, volume 1, 2004. (Type: Journal Article) [bibtex] [pdf]
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Localized mechanical stress induces time-dependent actin cytoskeletal remodeling and stiffening in cultured airway smooth muscle cells
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On the terminology for describing the length-force relationship and its changes in airway smooth muscle
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Role of Heat Shock Protein 27 in Cytoskeletal Remodeling of the Airway Smooth Muscle Cell
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Oscillatory magnetic tweezers based on ferromagnetic beads and simple coaxial coils
In Rev Sci Instrum, volume 74, 2003. (Type: Journal Article) [bibtex] [pdf]
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Intracellular stress tomography reveals stress focusing and structural anisotropy in cytoskeleton of living cells
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Time scale and other invariants of integrative mechanical behavior in living cells
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Remodeling of the airway smooth muscle cell: are we built of glass?
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Fractional derivatives embody essential features of cell rheological behavior
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Microrheology of human lung epithelial cells measured by atomic force microscopy
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[24] S. M. Mijailovich, M. Kojic, M. Zivkovic, B. Fabry, J. J. Fredberg
A finite element model of cell deformation during magnetic bead twisting
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Dynamic equilibration of airway smooth muscle contraction during physiological loading
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Traction fields, moments, and strain energy that cells exert on their surroundings
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Time course and heterogeneity of contractile responses in cultured human airway smooth muscle cells
In J Appl Physiol, volume 91, 2001. (Type: Journal Article) [bibtex] [pdf]
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Scaling the microrheology of living cells
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[19] J. Chen, B. Fabry, E. L. Schiffrin, N. Wang
Twisting integrin receptors increases endothelin-1 gene expression in endothelial cells
In Am J Physiol Cell Physiol, volume 280, 2001. (Type: Journal Article) [bibtex] [pdf]
2000
[18] C. J. Meyer, F. J. Alenghat, P. Rim, J. H. Fong, B. Fabry, D. E. Ingber
Mechanical control of cyclic AMP signalling and gene transcription through integrins
In Nat Cell Biol, volume 2, 2000. (Type: Journal Article) [bibtex] [pdf]
[17] G. N. Maksym, B. Fabry, J. P. Butler, D. Navajas, D. J. Tschumperlin, J. D. Laporte, J. J. Fredberg
Mechanical properties of cultured human airway smooth muscle cells from 0.05 to 0.4 Hz
In J Appl Physiol, volume 89, 2000. (Type: Journal Article) [bibtex] [pdf]
[16] F. J. Alenghat, B. Fabry, K. Y. Tsai, W. H. Goldmann, D. E. Ingber
Analysis of cell mechanics in single vinculin-deficient cells using a magnetic tweezer
In Biochem Biophys Res Commun, volume 277, 2000. (Type: Journal Article) [bibtex] [pdf]
1999
[15] J. D. Laporte, P. E. Moore, J. H. Abraham, G. N. Maksym, B. Fabry, R. A. Jr. Panettieri, S. A. Shore
Role of ERK MAP kinases in responses of cultured human airway smooth muscle cells to IL-1beta
In Am J Physiol, volume 277, 1999. (Type: Journal Article) [bibtex] [pdf]
[14] C. Haberthür, B. Fabry, R. Stocker, R. Ritz, J. Guttmann
Additional inspiratory work of breathing imposed by tracheostomy tubes and non-ideal ventilator properties in critically ill patients
In Intensive Care Med, volume 25, 1999. (Type: Journal Article) [bibtex] [pdf]
[13] B. Fabry, G.N. Maksym, R.D. Hubmayr, J.P. Butler, J.J. Fredberg
Implications of heterogeneous bead behavior on cell mechanical properties measured with magnetic twisting cytometry
In J Magnetism Magnetic Materials, volume 194, 1999. (Type: Journal Article) [bibtex] [pdf]
[12] L. Eberhard, C. Haberthur, B. Fabry, J. Guttmann
Dynamic delay time compensation for sampling capillaries used in respiratory mass spectrometry
In Technol Health Care, volume 7, 1999. (Type: Journal Article) [bibtex] [pdf]
1998
[11] C. Haberthür, B. Fabry, D. Zappe, J. Guttmann
Effects of mechanical unloading/loading on respiratory loop gain and periodic breathing in man
In Respir Physiol, volume 112, 1998. (Type: Journal Article) [bibtex] [pdf]
1997
[10] R. Stocker, B. Fabry, L. Eberhard, C. Haberthur
Support of spontaneous breathing in the intubated patient: automatic tube compensation (ATC) and proportional assist ventilation (PAV)
In Acta Anaesthesiol Scand Suppl, volume 111, 1997. (Type: Journal Article) [bibtex] [pdf]
[9] M. Lichtwarck-Aschoff, J. Guttmann, L. Eberhard, B. Fabry, J. Birle, M. Adolph
Delayed derecruitment after removal of PEEP in patients with acute lung injury
In Acta Anaesthesiol Scand, volume 41, 1997. (Type: Journal Article) [bibtex] [pdf]
[8] J. Guttmann, H. Bernhard, G. Mols, A. Benzing, P. Hofmann, C. Haberthur, D. Zappe, B. Fabry, K. Geiger
Respiratory comfort of automatic tube compensation and inspiratory pressure support in conscious humans
In Intensive Care Med, volume 23, 1997. (Type: Journal Article) [bibtex] [pdf]
[7] B. Fabry, C. Haberthur, D. Zappe, J. Guttmann, R. Kuhlen, R. Stocker
Breathing pattern and additional work of breathing in spontaneously breathing patients with different ventilatory demands during inspiratory pressure support and automatic tube compensation
In Intensive Care Med, volume 23, 1997. (Type: Journal Article) [bibtex] [pdf]
1996
[6] R. Stocker, B. Fabry, S. Stein, D. Zappe, O. Trentz, C. Haberthur
[Added work of breathing, respiratory pattern and determination of ventilator weaning readiness in inspiratory pressure support and and automatic tube compensation]
In Unfallchirurg, volume 99, 1996. (Type: Journal Article) [bibtex] [pdf]
1995
[5] J. Guttmann, L. Eberhard, B. Fabry, W. Bertschmann, J. Zeravik, M. Adolph, J. Eckart, G. Wolff
Time constant/volume relationship of passive expiration in mechanically ventilated ARDS patients
In Eur Respir J, volume 8, 1995. (Type: Journal Article) [bibtex] [pdf]
[4] B. Fabry, J. Guttmann, L. Eberhard, T. Bauer, C. Haberthur, G. Wolff
An analysis of desynchronization between the spontaneously breathing patient and ventilator during inspiratory pressure support
In Chest, volume 107, 1995. (Type: Journal Article) [bibtex] [pdf]
1994
[3] B. Fabry, J. Guttmann, L. Eberhard, G. Wolff
Treatment of patient-ventilator desynchronization with automatic tube compensation (ATC) and propoertional assist ventilation
In Int Care Med, volume 20, 1994. (Type: Journal Article) [bibtex] [pdf]
[2] B. Fabry, J. Guttmann, L. Eberhard, G. Wolff
Automatic compensation of endotracheal tube resistance in spontaneously breathing patients
In Technol Health Care, volume 1, 1994. (Type: Journal Article) [bibtex] [pdf] [doi]
1993
[1] J. Guttmann, L. Eberhard, B. Fabry, W. Bertschmann, G. Wolff
Continuous calculation of intratracheal pressure in tracheally intubated patients
In Anesthesiology, volume 79, 1993. (Type: Journal Article) [bibtex] [pdf]